RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 PDHA2P29803 388 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 CSE1LP55060 971 aaKnown RBP15.74■□□□□ 0.11
COMMD4-206ENST00000562610 RPA4Q13156 261 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 ZNF658BQ4V348 819 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-206ENST00000562610 KIAA0930Q6ICG6 404 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-206ENST00000562610 CAPRIN2Q6IMN6 1127 aaKnown RBP15.74■□□□□ 0.11
COMMD4-206ENST00000562610 KLHL35Q6PF15 583 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 FAM92BQ6ZTR7 304 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 PDZD3Q86UT5 571 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 NAT8LQ8N9F0 302 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 SLCO2A1Q92959 643 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 ZDHHC12Q96GR4 267 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 C9orf72Q96LT7 481 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 FERD3LQ96RJ6 166 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 TRIM56Q9BRZ2 755 aaKnown RBP15.74■□□□□ 0.11
COMMD4-206ENST00000562610 KIR3DX1Q9H7L2 352 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 OCIAD1Q9NX40 245 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 FOXJ2Q9P0K8 574 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 PDP2Q9P2J9 529 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 SLC24A2Q9UI40 661 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 MAD1L1Q9Y6D9 718 aa15.74■□□□□ 0.11
COMMD4-206ENST00000562610 SDR42E2A6NKP2 422 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 C9orf172C9J069 976 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 DNALI1O14645 258 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-206ENST00000562610 NVLO15381 856 aaKnown RBP15.73■□□□□ 0.11
COMMD4-206ENST00000562610 ARNTP27540 789 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 NDUFS1P28331 727 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 PTGIRP43119 386 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 SEPHS1P49903 392 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 PPP1CAP62136 330 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 DR1Q01658 176 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 DHX34Q14147 1143 aaKnown RBP15.73■□□□□ 0.11
COMMD4-206ENST00000562610 RNASEH2BQ5TBB1 312 aaKnown RBP15.73■□□□□ 0.11
COMMD4-206ENST00000562610 BROXQ5VW32 411 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 IZUMO3Q5VZ72 239 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 PTRHD1Q6GMV3 140 aaKnown RBP15.73■□□□□ 0.11
COMMD4-206ENST00000562610 MRNIPQ6NTE8 343 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 ARHGAP22Q7Z5H3 698 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 OOSP2Q86WS3 158 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 PMEPA1Q969W9 287 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 RUNDC3BQ96NL0 473 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 HGH1Q9BTY7 390 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 SLC39A1Q9NY26 324 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 IL1RAPL1Q9NZN1 696 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 GNPTGQ9UJJ9 305 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 LHX6Q9UPM6 363 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 RPS6KL1Q9Y6S9 549 aa15.73■□□□□ 0.11
COMMD4-206ENST00000562610 SNRNP200O75643 2136 aaKnown RBP15.73■□□□□ 0.11
COMMD4-206ENST00000562610 FAM237BA0A1B0GVD1 139 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 IQCF5A8MTL0 148 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 B4E171 279 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 CCDC188H7C350 402 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 PRMT5O14744 637 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-206ENST00000562610 KIF1CO43896 1103 aaKnown RBP15.72■□□□□ 0.11
COMMD4-206ENST00000562610 ANKRD34CP0C6C1 535 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 CASQ1P31415 396 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 TSPAN7P41732 249 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 CD151P48509 253 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 EIF3BP55884 814 aaKnown RBP15.72■□□□□ 0.11
COMMD4-206ENST00000562610 RAB15P59190 212 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 TLE3Q04726 772 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 CACHD1Q5VU97 1274 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 ARMC3Q5W041 872 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 ANKS6Q68DC2 871 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 ARMC6Q6NXE6 501 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 PCGF5Q86SE9 256 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 SDCCAG8Q86SQ7 713 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-206ENST00000562610 KRT222Q8N1A0 295 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 ACVR1CQ8NER5 493 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 LKAAEAR1Q8TD35 194 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 ZFPM2Q8WW38 1151 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 TFGQ92734 400 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-206ENST00000562610 CRELD1Q96HD1 420 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 TAAR9Q96RI9 348 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 TRIM51Q9BSJ1 452 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 DPH1Q9BZG8 443 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 KCND1Q9NSA2 647 aa15.72■□□□□ 0.11
COMMD4-206ENST00000562610 DSPP15924 2871 aaKnown RBP15.72■□□□□ 0.11
COMMD4-206ENST00000562610 OR6C74A6NCV1 312 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 OR5K3A6NET4 321 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 PFDN6O15212 129 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 LIPCP11150 499 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 OGNP20774 298 aaKnown RBP15.71■□□□□ 0.11
COMMD4-206ENST00000562610 MAGEA3P43357 314 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 ARCN1P48444 511 aaKnown RBP15.71■□□□□ 0.11
COMMD4-206ENST00000562610 HSPA14Q0VDF9 509 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 PRKG2Q13237 762 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 CLN3Q13286 438 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 TMED2Q15363 201 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 DNTTIP2Q5QJE6 756 aaKnown RBP15.71■□□□□ 0.11
COMMD4-206ENST00000562610 DCAF12Q5T6F0 453 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 RNF187Q5TA31 235 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-206ENST00000562610 SYT10Q6XYQ8 523 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 SYDE1Q6ZW31 735 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-206ENST00000562610 PRSS42Q7Z5A4 293 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 ZFAND4Q86XD8 727 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 PHC3Q8NDX5 983 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 OR4E2Q8NGC2 313 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 LCN9Q8WX39 176 aa15.71■□□□□ 0.11
COMMD4-206ENST00000562610 STAMBPL1Q96FJ0 436 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms