RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SLC46A1Q96NT5 459 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 OCIAD1Q9NX40 245 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 GRHL1Q9NZI5 618 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 SAMD15Q9P1V8 674 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 KLHL3Q9UH77 587 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 SLC24A2Q9UI40 661 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 ANAPC5Q9UJX4 755 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 CRYL1Q9Y2S2 319 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 LOXL2Q9Y4K0 774 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 FAM169AQ9Y6X4 670 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 SDK2Q58EX2 2172 aa13.56□□□□□ -0.24
TPM1-230ENST00000561266 UBA6A0AVT1 1052 aaPredicted RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 MAGEB16A2A368 324 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 CDRT15L2A8MXV6 281 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 PLD2O14939 933 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 DUX1O43812 170 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 NIPSNAP2O75323 286 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 GPC4O75487 556 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 NDUFS3O75489 264 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 DXOO77932 396 aaKnown RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 TNFSF15O95150 251 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 C9P02748 559 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 SLC35G4P0C7Q5 338 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 OR56A5P0C7T3 313 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 ERVK-10P10266 1014 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 FGF3P11487 239 aaPredicted RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 RPS3P23396 243 aaKnown RBP eCLIP13.55□□□□□ -0.24
TPM1-230ENST00000561266 AOAHP28039 575 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 SLC1A2P43004 574 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 TTPAP49638 278 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 EIF3BP55884 814 aaKnown RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 MPP1Q00013 466 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 CRYMQ14894 314 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 TRMT10BQ6PF06 316 aaKnown RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 WDR74Q6RFH5 385 aaPredicted RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 PDZD3Q86UT5 571 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 ANKMY2Q8IV38 441 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 FBXO39Q8N4B4 442 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 OTUD6BQ8N6M0 293 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 LMNTD1Q8N9Z9 388 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 OR5AR1Q8NGP9 310 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 ZNF592Q92610 1267 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 FAM136AQ96C01 138 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 PPM1MQ96MI6 270 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 FERD3LQ96RJ6 166 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 SLC30A3Q99726 388 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 ERP44Q9BS26 406 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 CARD6Q9BX69 1037 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 STN1Q9H668 368 aaKnown RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 KIR3DX1Q9H7L2 352 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 FBXO6Q9NRD1 293 aaPredicted RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 C20orf96Q9NUD7 363 aaPredicted RBP13.55□□□□□ -0.24
TPM1-230ENST00000561266 CHMP2BQ9UQN3 213 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 MED16Q9Y2X0 877 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 TEX264Q9Y6I9 313 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 AHCTF1Q8WYP5 2266 aa13.55□□□□□ -0.24
TPM1-230ENST00000561266 SPTBP11277 2137 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 KLHL33A6NCF5 533 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 KRT87PA6NCN2 255 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 TMEM8BA6NDV4 472 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 FAM187AA6NFU0 413 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 LIN7AO14910 233 aaPredicted RBP13.54□□□□□ -0.24
TPM1-230ENST00000561266 CAPN5O15484 640 aaPredicted RBP13.54□□□□□ -0.24
TPM1-230ENST00000561266 FTH1P02794 183 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 PGAM1P18669 254 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 OGNP20774 298 aaKnown RBP13.54□□□□□ -0.24
TPM1-230ENST00000561266 GABRB3P28472 473 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 PPM1FP49593 454 aaPredicted RBP13.54□□□□□ -0.24
TPM1-230ENST00000561266 TIAL1Q01085 375 aaKnown RBP eCLIP13.54□□□□□ -0.24
TPM1-230ENST00000561266 SLC7A5Q01650 507 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 RPA4Q13156 261 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 PRKG2Q13237 762 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 CLPPQ16740 277 aaPredicted RBP13.54□□□□□ -0.24
TPM1-230ENST00000561266 LONRF1Q17RB8 773 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 TBC1D25Q3MII6 688 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 HSP90AA5PQ58FG0 334 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 AARS2Q5JTZ9 985 aaKnown RBP13.54□□□□□ -0.24
TPM1-230ENST00000561266 ARMC3Q5W041 872 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 ZNF470Q6ECI4 717 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 FBXO38Q6PIJ6 1188 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 UNC5AQ6ZN44 842 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 TFGQ92734 400 aaPredicted RBP13.54□□□□□ -0.24
TPM1-230ENST00000561266 GRAMD1AQ96CP6 724 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 RNF31Q96EP0 1072 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 TGM7Q96PF1 710 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 XKR8Q9H6D3 395 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 IARS2Q9NSE4 1012 aaKnown RBP13.54□□□□□ -0.24
TPM1-230ENST00000561266 PISDQ9UG56 409 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 PCDHGA8Q9Y5G5 932 aa13.54□□□□□ -0.24
TPM1-230ENST00000561266 MN1Q10571 1320 aaPredicted RBP13.54□□□□□ -0.24
TPM1-230ENST00000561266 PKD1L2Q7Z442 2459 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 ANKRD12Q6UB98 2062 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 C9orf172C9J069 976 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 E7ESA3 106 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 BTN3A3O00478 584 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 HAUS5O94927 633 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 AMD1P17707 334 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 ABCG1P45844 678 aa13.53□□□□□ -0.24
TPM1-230ENST00000561266 CAPZBP47756 277 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms