RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CNTNAP1P78357 1384 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 COL11A2P13942 1736 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 UBR3Q6ZT12 1888 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 KIAA1217Q5T5P2 1943 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 LOC105371267A0A1B0GV96 52 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TMEM150BA6NC51 233 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 PRR33A8MZF0 331 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 H0Y858 1186 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 FXYD1O00168 92 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ARVCFO00192 962 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 PSMD11O00231 422 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TNPO2O14787 897 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ANGPT2O15123 496 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 NCAM2O15394 837 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 GUCY1B2O75343 617 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ULK1O75385 1050 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SEC24AO95486 1093 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 NADKO95544 446 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SNAP29O95721 258 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CRYZL1O95825 349 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 APOA1P02647 267 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SOD2P04179 222 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ALPLP05186 524 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ABCB1P08183 1280 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 RBP1P09455 135 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 HOXC6P09630 235 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SUPT20HL2P0C7V6 817 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC35E2BP0CK96 405 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ERVK-10P10266 1014 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ITGAMP11215 1152 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CD1EP15812 388 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SHMT2P34897 504 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 EPHX2P34913 555 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 RYKP34925 604 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 RCVRNP35243 200 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 DDOSTP39656 456 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ARL4AP40617 200 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC26A3P40879 764 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ETV6P41212 452 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 GRIA1P42261 906 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 KIR3DL1P43629 444 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 LSSP48449 732 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF135P52742 658 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC6A3Q01959 620 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TNFAIP2Q03169 654 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 GBE1Q04446 702 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 PRKCDQ05655 676 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 DMPKQ09013 629 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 HSPA14Q0VDF9 509 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 USP10Q14694 798 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 GRM3Q14832 879 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 POLD3Q15054 466 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CDK10Q15131 360 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 FSCN1Q16658 493 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 DUSP7Q16829 419 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 PGS1Q32NB8 556 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 GFOD2Q3B7J2 385 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SUPT20HL1Q3ZLR7 823 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TECRLQ5HYJ1 363 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SYT6Q5T7P8 510 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TSTD2Q5T7W7 516 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 AGAP6Q5VW22 663 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 OR6B2Q6IFH4 312 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 PRR5LQ6MZQ0 368 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TRNP1Q6NT89 227 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 PNCKQ6P2M8 343 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SYCE2Q6PIF2 218 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 XKRXQ6PP77 449 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 USP43Q70EL4 1123 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 PDZD4Q76G19 769 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 BEND5Q7L4P6 421 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 EFL1Q7Z2Z2 1120 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 R3HCC1LQ7Z5L2 792 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 PTAR1Q7Z6K3 402 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 GALNT7Q86SF2 657 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ADAMTSL2Q86TH1 951 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 RIOX2Q8IUF8 465 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CCDC103Q8IW40 242 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 ZFPM1Q8IX07 1006 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TP53INP2Q8IXH6 220 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 RIMKLAQ8IXN7 391 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 DCP1BQ8IZD4 617 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CENPLQ8N0S6 344 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TTLL6Q8N841 843 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 C2orf69Q8N8R5 385 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 CHST14Q8NCH0 376 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SETD9Q8NE22 299 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 MAGEE2Q8TD90 523 aaPredicted RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SLC22A17Q8WUG5 538 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 FCGR1BQ92637 280 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TMEM125Q96AQ2 219 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 NACC2Q96BF6 587 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 DCPSQ96C86 337 aaKnown RBP5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 SDCCAG3Q96C92 435 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 L3HYPDHQ96EM0 354 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 TCTN2Q96GX1 697 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 MASTLQ96GX5 879 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 MUS81Q96NY9 551 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 AGAP4Q96P64 663 aa5.88□□□□□ -1.47
SNRPA1-209ENST00000560307 GPR78Q96P69 363 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms