RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZZEF1O43149 2961 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 DSPP15924 2871 aaKnown RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 FASNP49327 2511 aaKnown RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 A0A0J9YYE9 177 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 CAPN8A6NHC0 703 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 A8MU76 341 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 TMX2-CTNND1H3BSU7 103 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 PSMD11O00231 422 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 B4GAT1O43505 415 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 NUDT21O43809 227 aaKnown RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 SOD1P00441 154 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 TRBC1P01850 177 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 FGF1P05230 155 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 KRT7P08729 469 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 GSTM1P09488 218 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 CCL4P13236 92 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 ACP5P13686 325 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 CA4P22748 312 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 CCKBRP32239 447 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 ARSEP51690 589 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 RHDQ02161 417 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 NIPAL4Q0D2K0 466 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 ZBTB17Q13105 803 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 IHHQ14623 411 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 C16orf72Q14CZ0 275 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 PAFAH1B3Q15102 231 aaKnown RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 PDK2Q15119 407 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 NPNTQ6UXI9 565 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 CHST15Q7LFX5 561 aaPredicted RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 CLEC14AQ86T13 490 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 NRROSQ86YC3 692 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 RFX6Q8HWS3 928 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 GALNT13Q8IUC8 556 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 CCDC13Q8IYE1 715 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 TEX26Q8N6G2 289 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 PQLC3Q8N755 202 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 PHC3Q8NDX5 983 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 OR8K1Q8NGG5 319 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 IQCDQ96DY2 449 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 AHCYL2Q96HN2 611 aaKnown RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 MCCC1Q96RQ3 725 aaPredicted RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 CCNL2Q96S94 520 aaPredicted RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 CMKLR1Q99788 373 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 ZNF670Q9BS34 389 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 TDRD1Q9BXT4 1180 aaKnown RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 MAK16Q9BXY0 300 aaKnown RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 DPH1Q9BZG8 443 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 OSGEPL1Q9H4B0 414 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 PCDH9Q9HC56 1237 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 HAUS2Q9NVX0 235 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 FOXJ2Q9P0K8 574 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 AKAP7Q9P0M2 348 aaPredicted RBP7.26□□□□□ -1.25
SPG11-213ENST00000558988 UVRAGQ9P2Y5 699 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 APPL1Q9UKG1 709 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 SHOC2Q9UQ13 582 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 KCNK6Q9Y257 313 aa7.26□□□□□ -1.25
SPG11-213ENST00000558988 A0A087X1B8 175 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 APOL1O14791 398 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 CBFA2T2O43439 604 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 SPOPO43791 374 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 CPNE6O95741 557 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 PRLP01236 227 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 IVLP07476 585 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 HOXC4P09017 264 aaPredicted RBP7.25□□□□□ -1.25
SPG11-213ENST00000558988 ZNF30P17039 623 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 KDELR1P24390 212 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 CCNCP24863 283 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 STC1P52823 247 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 CYP4F2P78329 520 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 B4GALNT1Q00973 533 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 SLC10A2Q12908 348 aaPredicted RBP7.25□□□□□ -1.25
SPG11-213ENST00000558988 EIF3IQ13347 325 aaKnown RBP7.25□□□□□ -1.25
SPG11-213ENST00000558988 NFATC2Q13469 925 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 SLC18A3Q16572 532 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 MANEAQ5SRI9 462 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 KAZNQ674X7 775 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 PCSK4Q6UW60 755 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 TECPR1Q7Z6L1 1165 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 LRRC49Q8IUZ0 686 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 NRSN1Q8IZ57 195 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 NAGSQ8N159 534 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 ZNF843Q8N446 348 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 EXD1Q8NHP7 514 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 SLC35G2Q8TBE7 412 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 ARRDC2Q8TBH0 407 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 CCHCR1Q8TD31 782 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 CCDC42Q96M95 316 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 AGAP3Q96P47 875 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 CHP1Q99653 195 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 SEMA4CQ9C0C4 833 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 TRNAU1APQ9NX07 287 aaKnown RBP7.25□□□□□ -1.25
SPG11-213ENST00000558988 KCTD5Q9NXV2 234 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 UBP1Q9NZI7 540 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 DTLQ9NZJ0 730 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 PKD2L2Q9NZM6 624 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 TMEM9Q9P0T7 183 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 SLC17A4Q9Y2C5 497 aa7.25□□□□□ -1.25
SPG11-213ENST00000558988 IGHV5-10-1A0A0J9YXX1 117 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 EFCAB7A8K855 629 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 K7ENP7 123 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms