RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CCNG2Q16589 344 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 TBR1Q16650 682 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 DNTTIP2Q5QJE6 756 aaKnown RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 ATP1A1-AS1Q5TC04 95 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 ARMC6Q6NXE6 501 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 C16orf46Q6P387 395 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 RBM12BQ8IXT5 1001 aaKnown RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 NLGN4XQ8N0W4 816 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 LMNTD1Q8N9Z9 388 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 SIDT2Q8NBJ9 832 aaKnown RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 NLGN4YQ8NFZ3 816 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 OR13J1Q8NGT2 312 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 SNRNP27Q8WVK2 155 aaKnown RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 ELMO1Q92556 727 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 LINC00615Q96LM1 132 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 HGH1Q9BTY7 390 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 FRMD8P1Q9BZ68 369 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 ULBP3Q9BZM4 244 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 SPRY4Q9C004 299 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 GPN2Q9H9Y4 310 aaPredicted RBP12.2□□□□□ -0.46
SMAD3-208ENST00000558827 CASS4Q9NQ75 786 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 CHRAC1Q9NRG0 131 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 PAK5Q9P286 719 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 CIDEBQ9UHD4 219 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 LNPEPQ9UIQ6 1025 aa12.2□□□□□ -0.46
SMAD3-208ENST00000558827 GCN1Q92616 2671 aaKnown RBP12.19□□□□□ -0.46
SMAD3-208ENST00000558827 IGLV3-16A0A075B6K0 115 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 TCRBV7S3A2A0A539 114 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 HEATR9A2RTY3 570 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 OR5K3A6NET4 321 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 IQCF5A8MTL0 148 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 H7C0S8 307 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 BTN3A3O00478 584 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 KATNA1O75449 491 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 SPAG6O75602 509 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 SUN1O94901 812 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 NTRK1P04629 796 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 ANKRD34CP0C6C1 535 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 F8A1P23610 371 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 ADRA1DP25100 572 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 KPNA2P52292 529 aaKnown RBP12.19□□□□□ -0.46
SMAD3-208ENST00000558827 SEMA5AQ13591 1074 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 BOP1Q14137 746 aaKnown RBP12.19□□□□□ -0.46
SMAD3-208ENST00000558827 GPR19Q15760 415 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 ZNF534Q76KX8 674 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 PRSS42Q7Z5A4 293 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 OOSP2Q86WS3 158 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 LKAAEAR1Q8TD35 194 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 HEXDCQ8WVB3 486 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 LCN9Q8WX39 176 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 KLHL6Q8WZ60 621 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 TEFMQ96QE5 360 aaKnown RBP12.19□□□□□ -0.46
SMAD3-208ENST00000558827 SLC12A9Q9BXP2 914 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 AP1M1Q9BXS5 423 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 B3GNT4Q9C0J1 378 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 OR52A5Q9H2C5 316 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 KIR3DX1Q9H7L2 352 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 TRMT1Q9NXH9 659 aaKnown RBP12.19□□□□□ -0.46
SMAD3-208ENST00000558827 MARCH4Q9P2E8 410 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-208ENST00000558827 PLAGL1Q9UM63 463 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 TCAF1Q9Y4C2 921 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 COLEC10Q9Y6Z7 277 aa12.19□□□□□ -0.46
SMAD3-208ENST00000558827 COL6A6A6NMZ7 2263 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 SLC9B1P1A6NJY1 282 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 ERI2A8K979 691 aaKnown RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 IFRD1O00458 451 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 DLGAP3O95886 979 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 F7P08709 466 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 PVRP15151 417 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 NELFEP18615 380 aaKnown RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 CDH3P22223 829 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 MGAT1P26572 445 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 NMBRP28336 390 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 PRAMEP78395 509 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 TUBB3Q13509 450 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 PRAMEF17Q5VTA0 474 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 PWWP2BQ6NUJ5 590 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 KLHL35Q6PF15 583 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 C6orf15Q6UXA7 325 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 TRIM73Q86UV7 250 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 SPNS2Q8IVW8 549 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 KRT222Q8N1A0 295 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 PRELID2Q8N945 189 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 PPHLN1Q8NEY8 458 aaKnown RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 TRIM58Q8NG06 486 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 OR5AR1Q8NGP9 310 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 OR4L1Q8NH43 312 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 CFAP61Q8NHU2 1237 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 TFGQ92734 400 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 RUFY1Q96T51 708 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 SRMSQ9H3Y6 488 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 AKIRIN1Q9H9L7 192 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 GRPEL1Q9HAV7 217 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 SOHLH2Q9NX45 425 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 EPHA6Q9UF33 1036 aa12.18□□□□□ -0.46
SMAD3-208ENST00000558827 TSR3Q9UJK0 312 aaKnown RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 DRG1Q9Y295 367 aaKnown RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 TDRKHQ9Y2W6 561 aaKnown RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 TMEM184BQ9Y519 407 aaPredicted RBP12.18□□□□□ -0.46
SMAD3-208ENST00000558827 RPS6KL1Q9Y6S9 549 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms