RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 LYSMD1Q96S90 227 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 CNPY3Q9BT09 278 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 LHPPQ9H008 270 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 DEF6Q9H4E7 631 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 ZFYVE1Q9HBF4 777 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 NPDC1Q9NQX5 325 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-206ENST00000558739 PKD2L2Q9NZM6 624 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 ADAM22Q9P0K1 906 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 NDOR1Q9UHB4 597 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 PCSK1NQ9UHG2 260 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
SMAD3-206ENST00000558739 DNAJC13O75165 2243 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 SIGLEC16A6NMB1 481 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 GPR89AB7ZAQ6 455 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 GFPT2O94808 682 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 CDK14O94921 469 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 SLCO2B1O94956 709 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 GPR89BP0CG08 455 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 UNGP13051 313 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-206ENST00000558739 IGFBP2P18065 325 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 HLA-DPA1P20036 260 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 ITGAXP20702 1163 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 TNFSF10P50591 281 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 CTSCP53634 463 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 GSCP56915 257 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-206ENST00000558739 ARG2P78540 354 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 ADCY2Q08462 1091 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 ITKQ08881 620 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 QPCTQ16769 361 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 MON1BQ7L1V2 547 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 ATPAF2Q8N5M1 289 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 LRRN4Q8WUT4 740 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 ARSGQ96EG1 525 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 INSM2Q96T92 566 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-206ENST00000558739 NUP85Q9BW27 656 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 SPRTNQ9H040 489 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-206ENST00000558739 TSPAN10Q9H1Z9 355 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-206ENST00000558739 FAM60AQ9NP50 221 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 CDC23Q9UJX2 597 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 MEMO1Q9Y316 297 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 TTLL3Q9Y4R7 772 aa11.47□□□□□ -0.57
SMAD3-206ENST00000558739 GSAPA4D1B5 854 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 MMP11P24347 488 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 PBLDP30039 288 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-206ENST00000558739 ADAM8P78325 824 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 DCDP81605 110 aaKnown RBP11.46□□□□□ -0.57
SMAD3-206ENST00000558739 CDR2Q01850 454 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 NIPAL4Q0D2K0 466 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 LONRF1Q17RB8 773 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 ANKRD20A8PQ5CZ79 823 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 RALGPS1Q5JS13 557 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 MARC1Q5VT66 337 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 KLHDC7AQ5VTJ3 777 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 ARMC6Q6NXE6 501 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 DNAJC24Q6P3W2 148 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 NDUFAF2Q8N183 169 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 CCDC34Q96HJ3 373 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 TRIM7Q9C029 511 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 ABI3Q9P2A4 366 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 FAM8A1Q9UBU6 413 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 SERTAD3Q9UJW9 196 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 SHOC2Q9UQ13 582 aa11.46□□□□□ -0.57
SMAD3-206ENST00000558739 VEGFDO43915 354 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 C8BP07358 591 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 MSL3P1P0C860 447 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 UCHL3P15374 230 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 AMPD1P23109 780 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 NSFP46459 744 aaKnown RBP11.45□□□□□ -0.58
SMAD3-206ENST00000558739 XRCC4Q13426 336 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 INAQ16352 499 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.45□□□□□ -0.58
SMAD3-206ENST00000558739 NKAIN1Q4KMZ8 207 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 IRAK1BP1Q5VVH5 260 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 RHBDD2Q6NTF9 364 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 TRIM73Q86UV7 250 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 BEND7Q8N7W2 519 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-206ENST00000558739 WFDC11Q8NEX6 87 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 OR11G2Q8NGC1 345 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 OR4E2Q8NGC2 313 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 ARRDC2Q8TBH0 407 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 SPSB2Q99619 263 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 ZSCAN5AQ9BUG6 496 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 PITPNM3Q9BZ71 974 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 WWP1Q9H0M0 922 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 KIR3DX1Q9H7L2 352 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 PCDH9Q9HC56 1237 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 C1GALT1Q9NS00 363 aa11.45□□□□□ -0.58
SMAD3-206ENST00000558739 TRAV17A0A0B4J275 112 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 BTN3A3O00478 584 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 BTN3A1O00481 513 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 OR2B3O76000 313 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 FOSL1P15407 271 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 TCF4P15884 667 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 PRDX3P30048 256 aaKnown RBP11.44□□□□□ -0.58
SMAD3-206ENST00000558739 SOX11P35716 441 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 CASP6P55212 293 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 ZIC1Q15915 447 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 CLEC16AQ2KHT3 1053 aa11.44□□□□□ -0.58
SMAD3-206ENST00000558739 ATP13A5Q4VNC0 1218 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms