RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 VAT1Q99536 393 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 SH3GL1Q99961 368 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 RHNO1Q9BSD3 238 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 SLIRPQ9GZT3 109 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 NKX2-4Q9H2Z4 354 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ACTR8Q9H981 624 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ENTPD7Q9NQZ7 604 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 RGS18Q9NS28 235 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 PAQR5Q9NXK6 330 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 DNAJB9Q9UBS3 223 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 GTF2IRD1Q9UHL9 959 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ADGRE2Q9UHX3 823 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 UTS2RQ9UKP6 389 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 WBP11Q9Y2W2 641 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 NME7Q9Y5B8 376 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ASPDHA6ND91 283 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 MYADML2A6NDP7 307 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 AREL1O15033 823 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ZW10O43264 779 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 RGS10O43665 173 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 AIREO43918 545 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 MITFO75030 526 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 MED26O95402 600 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 MATN4O95460 622 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 PTTG1O95997 202 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 GOT2P00505 430 aaKnown RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 HPRP00739 348 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 VTNP04004 478 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 CCDC159P0C7I6 412 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF37AP17032 561 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 PRKCAP17252 672 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ARF4P18085 180 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 FMO4P31512 558 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 GRIK1P39086 918 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 CXCR3P49682 368 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 CDKN2DP55273 166 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ISL1P61371 349 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 DAB2P98082 770 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 GALNT1Q10472 559 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 GTF2H3Q13889 308 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ACOX1Q15067 660 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 CRY1Q16526 586 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 SMU1Q2TAY7 513 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 FAM214AQ32MH5 1076 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 AHSA2Q719I0 299 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 LRRC8DQ7L1W4 858 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 LACC1Q8IV20 430 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 HID1Q8IV36 788 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 CNTN4Q8IWV2 1026 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 RIMKLAQ8IXN7 391 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 EDEM1Q92611 657 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 C18orf25Q96B23 403 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 PTERQ96BW5 349 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 C12orf42Q96LP6 360 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 GUCD1Q96NT3 240 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 NECAB3Q96P71 396 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 HBEGFQ99075 208 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 NUAK2Q9H093 628 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ABHD16BQ9H3Z7 469 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 TUBB1Q9H4B7 451 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 CCDC177Q9NQR7 707 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 USE1Q9NZ43 259 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 PCDHGA10Q9Y5H3 936 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF638Q14966 1978 aaKnown RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 COL2A1P02458 1487 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 IGKV6D-21A0A0A0MT36 114 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 FAM92AA1XBS5 289 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 KRT87PA6NCN2 255 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 OR51F1A6NGY5 319 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 AGAP5A6NIR3 686 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 EVPLLA8MZ36 301 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 TFECO14948 347 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 KMOO15229 486 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 GAS2O43903 313 aaKnown RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ICMTO60725 284 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 KATNA1O75449 491 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 EEDO75530 441 aaKnown RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 RECQL5O94762 991 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 CYP11A1P05108 521 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 LCKP06239 509 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 BMP8BP34820 402 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 KRR1Q13601 381 aaKnown RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 RCAN2Q14206 197 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 SMN1Q16637 294 aaKnown RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 SPATS1Q496A3 300 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 CEP78Q5JTW2 689 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF691Q5VV52 312 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 LINC00299Q6ZSB3 139 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 DET1Q7L5Y6 550 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ISCA2Q86U28 154 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 RIOX2Q8IUF8 465 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ADHFE1Q8IWW8 467 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 OR2T12Q8NG77 320 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 OR6J1Q8NGC5 347 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 RDH12Q96NR8 316 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF300Q96RE9 604 aaPredicted RBP4.99□□□□□ -1.61
HMG20A-204ENST00000558288 ACOX2Q99424 681 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 CXCL16Q9H2A7 254 aa4.99□□□□□ -1.61
HMG20A-204ENST00000558288 RPRD1BQ9NQG5 326 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms