RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 HMGCS2P54868 508 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 MADCAM1Q13477 382 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 INTS6LQ5JSJ4 861 aaKnown RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 OR2T5Q6IEZ7 315 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 RELL1Q8IUW5 271 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 OR2T29Q8NH02 315 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 MED30Q96HR3 178 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 TSSK3Q96PN8 268 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 CLCC1Q96S66 551 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 IFT172Q9UG01 1749 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 A0A1B0GVC2 190 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 A8MV72 311 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PRRG1O14668 218 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 TSPAN3O60637 253 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 LRATO95237 230 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 AP2A1O95782 977 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 IGSF6O95976 241 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 RYKP34925 604 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 SRSF11Q05519 484 aaKnown RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 MOGSQ13724 837 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PDIA6Q15084 440 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 IL17AQ16552 155 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 TFAP2DQ7Z6R9 452 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 CPNE9Q8IYJ1 553 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PHACTR4Q8IZ21 702 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 OR10G2Q8NGC3 310 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 SLC2A14Q8TDB8 520 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 NEDD4LQ96PU5 975 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 WACQ9BTA9 647 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ZBTB26Q9HCK0 441 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ZNF334Q9HCZ1 680 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PLEKHA6Q9Y2H5 1048 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ISM1B1AKI9 464 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 STMND1H3BQB6 276 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 hCG_2039718K7EN88 272 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 CDRT1O95170 752 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PLATP00750 562 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PROZP22891 400 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 FSHRP23945 695 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 BCL2L1Q07817 233 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PIGGQ5H8A4 983 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ZNF367Q7RTV3 350 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 TSPAN33Q86UF1 283 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PAQR7Q86WK9 346 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 FSTL5Q8N475 847 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 C1orf216Q8TAB5 229 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ANKMY1Q9P2S6 941 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PPIEQ9UNP9 301 aaKnown RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 NR2E1Q9Y466 385 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 TESMINQ9Y4I5 508 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 NME6O75414 186 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ARL6IP5O75915 188 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 B3GAT3O94766 335 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 MBL2P11226 248 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 CDK4P11802 303 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 GOT1P17174 413 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 LPOP22079 712 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ARSFP54793 590 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 CDH8P55286 799 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 POLR2LP62875 67 aaKnown RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ERVK-8P63133 956 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PTGR1Q14914 329 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 CLEC6AQ6EIG7 209 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ZNF782Q6ZMW2 699 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 RNF44Q7L0R7 432 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 STRADAQ7RTN6 431 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 MARCH9Q86YJ5 346 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 FAM109AQ8N4B1 249 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 SLC15A4Q8N697 577 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 GTF3C2Q8WUA4 911 aaPredicted RBP11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 FATE1Q969F0 183 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 FBXL20Q96IG2 436 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ELOVL4Q9GZR5 314 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 TCF7L1Q9HCS4 588 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ABCC13Q9NSE7 274 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ZIM2Q9NZV7 527 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 KCNIP3Q9Y2W7 256 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 PCDHB1Q9Y5F3 818 aa11.6□□□□□ -0.55
CSPG4P12-201ENST00000558282 ANXA2P2A6NMY6 339 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 PIP5K1BO14986 540 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 ANXA2P07355 339 aaKnown RBP11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 DLDP09622 509 aaKnown RBP11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 GSTM2P28161 218 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 CBFBQ13951 182 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 ZC3H12AQ5D1E8 599 aaKnown RBP11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 OR52E8Q6IFG1 317 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 SLC7A5P1Q8MH63 180 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 LINC00471Q8N535 108 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 PLD5Q8N7P1 536 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 CLP1Q92989 425 aaKnown RBP11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 LGALS12Q96DT0 336 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 ASB8Q9H765 288 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 ATP13A3Q9H7F0 1226 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 C3orf14Q9HBI5 128 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 IFT46Q9NQC8 304 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 MARK1Q9P0L2 795 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 KMOO15229 486 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 RASAL1O95294 804 aa11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 RPLP2P05387 115 aaKnown RBP11.59□□□□□ -0.55
CSPG4P12-201ENST00000558282 AQP1P29972 269 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms