RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 P4HTMQ9NXG6 502 aa5.04□□□□□ -1.6
SPG11-208ENST00000558155 DTLQ9NZJ0 730 aa5.04□□□□□ -1.6
SPG11-208ENST00000558155 NDOR1Q9UHB4 597 aa5.04□□□□□ -1.6
SPG11-208ENST00000558155 NOVA2Q9UNW9 492 aaKnown RBP5.04□□□□□ -1.6
SPG11-208ENST00000558155 PTRH2Q9Y3E5 179 aaKnown RBP5.04□□□□□ -1.6
SPG11-208ENST00000558155 TTLL3Q9Y4R7 772 aa5.04□□□□□ -1.6
SPG11-208ENST00000558155 AP1M2Q9Y6Q5 423 aa5.04□□□□□ -1.6
SPG11-208ENST00000558155 NAV3Q8IVL0 2385 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 CCDC66A2RUB6 948 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 KLHL33A6NCF5 533 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 TMCO5BA8MYB1 307 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 AGPSO00116 658 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 CCL21O00585 134 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 E2F3O00716 465 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 SIAH2O43255 324 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 GADD45BO75293 160 aaPredicted RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 FTLP02792 175 aaPredicted RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 MSL3P1P0C860 447 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 RARAP10276 462 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 MTHFD1P11586 935 aaKnown RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 FERP16591 822 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 POLR2CP19387 275 aaPredicted RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 NDUFS1P28331 727 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 KLK7P49862 253 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 KPNA2P52292 529 aaKnown RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 DCDP81605 110 aaKnown RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 OTUD4Q01804 1114 aaKnown RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 DMPKQ09013 629 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 NIPAL4Q0D2K0 466 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 GALNT2Q10471 571 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 ABRQ12979 859 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 GALNT3Q14435 633 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 BECN1Q14457 450 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 KRT81Q14533 505 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 IHHQ14623 411 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 PRKD1Q15139 912 aaPredicted RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 TESK1Q15569 626 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.03□□□□□ -1.6
SPG11-208ENST00000558155 ZFYVE27Q5T4F4 411 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 ZDHHC20Q5W0Z9 365 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 METRNLQ641Q3 311 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 RPUSD3Q6P087 351 aaKnown RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 FBXO38Q6PIJ6 1188 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 TMEM220Q6QAJ8 160 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 IGFL2Q6UWQ7 119 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 RPTNQ6XPR3 784 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 CYP4V2Q6ZWL3 525 aaPredicted RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 C11orf96Q7Z7L8 435 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 ANKRD20A12PQ8NF67 263 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 OR4E2Q8NGC2 313 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 GPR150Q8NGU9 434 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 OR2Y1Q8NGV0 311 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 OR1L3Q8NH93 324 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 ITLN2Q8WWU7 325 aaPredicted RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 FATE1Q969F0 183 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 ZNF653Q96CK0 615 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 EID2BQ96D98 161 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 CNDP1Q96KN2 507 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 C12orf66Q96MD2 445 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 VPS35Q96QK1 796 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 LMF1Q96S06 567 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 INSM2Q96T92 566 aaPredicted RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 TLR10Q9BXR5 811 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 AP1M1Q9BXS5 423 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 ZCCHC2Q9C0B9 1178 aaKnown RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 EPS8L2Q9H6S3 715 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 MRPL47Q9HD33 250 aaKnown RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.03□□□□□ -1.6
SPG11-208ENST00000558155 OLAHQ9NV23 265 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 IMP3Q9NV31 184 aaKnown RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 TAB2Q9NYJ8 693 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.03□□□□□ -1.6
SPG11-208ENST00000558155 IFT80Q9P2H3 777 aaPredicted RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 NFKBIL1Q9UBC1 381 aaPredicted RBP5.03□□□□□ -1.6
SPG11-208ENST00000558155 SLC24A2Q9UI40 661 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 ACSL5Q9ULC5 683 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 PSMD13Q9UNM6 376 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 SHOC2Q9UQ13 582 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 HEBP2Q9Y5Z4 205 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 SCINQ9Y6U3 715 aa5.03□□□□□ -1.6
SPG11-208ENST00000558155 TRGV8A0A0C4DH27 118 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 GSAPA4D1B5 854 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 FAM181BA6NEQ2 426 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PCDH17O14917 1159 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 EPHB6O15197 1021 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 DDX3YO15523 660 aaKnown RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 PRICKLE3O43900 615 aaPredicted RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 DIAPH2O60879 1101 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 HLA-DQB2P05538 268 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 MYBL2P10244 700 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PYGMP11217 842 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PIM1P11309 404 aaPredicted RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 ESRRAP11474 423 aaPredicted RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 GZMAP12544 262 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 CD1EP15812 388 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 HLA-DPA1P20036 260 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 MX2P20592 715 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 IL1R2P27930 398 aa5.02□□□□□ -1.61
SPG11-208ENST00000558155 PRDX3P30048 256 aaKnown RBP5.02□□□□□ -1.61
SPG11-208ENST00000558155 CD86P42081 329 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms