RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 KIR2DS5Q14953 304 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 NR0B2Q15466 257 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 C14orf28Q4W4Y0 310 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 VRK3Q8IV63 474 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 SPNS2Q8IVW8 549 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 TRIM48Q8IWZ4 208 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 FAM181AQ8N9Y4 354 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 GPR156Q8NFN8 814 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 GIMAP7Q8NHV1 300 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 MAPK15Q8TD08 544 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 CD200R1Q8TD46 325 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 SKA2Q8WVK7 121 aaPredicted RBP20.81■□□□□ 0.92
CASC4-204ENST00000557945 C12orf66Q96MD2 445 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 GPR22Q99680 433 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 OR52A5Q9H2C5 316 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 LATS2Q9NRM7 1088 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 IMP3Q9NV31 184 aaKnown RBP20.81■□□□□ 0.92
CASC4-204ENST00000557945 KLHL42Q9P2K6 505 aa20.81■□□□□ 0.92
CASC4-204ENST00000557945 CFAP20Q9Y6A4 193 aaKnown RBP20.81■□□□□ 0.92
CASC4-204ENST00000557945 CCDC151A5D8V7 595 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 SHBGP04278 402 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 PGGT1BP53609 377 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 TAS2R39P59534 338 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 TIAL1Q01085 375 aaKnown RBP eCLIP20.8■□□□□ 0.92
CASC4-204ENST00000557945 POU4F1Q01851 419 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 BMPR2Q13873 1038 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 USP10Q14694 798 aaKnown RBP20.8■□□□□ 0.92
CASC4-204ENST00000557945 RPE65Q16518 533 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 PROX2Q3B8N5 592 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 ACSBG2Q5FVE4 666 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 MROH9Q5TGP6 573 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 TAOK1Q7L7X3 1001 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 SFRP1Q8N474 314 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 ARL14Q8N4G2 192 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 SLC37A2Q8TED4 501 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 CXorf40BQ96DE9 158 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 RMDN2Q96LZ7 410 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 INSM2Q96T92 566 aaPredicted RBP20.8■□□□□ 0.92
CASC4-204ENST00000557945 CDC6Q99741 560 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 CAB39LQ9H9S4 337 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 NCKIPSDQ9NZQ3 722 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 PADI4Q9UM07 663 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 CDYLQ9Y232 598 aa20.8■□□□□ 0.92
CASC4-204ENST00000557945 SLCO2B1O94956 709 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 SERPINB9P50453 376 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 KRT33BQ14525 404 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 CAPRIN2Q6IMN6 1127 aaKnown RBP20.79■□□□□ 0.92
CASC4-204ENST00000557945 PAQR3Q6TCH7 311 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 PIP4P1Q86T03 277 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 SLC9B2Q86UD5 537 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 PDZD3Q86UT5 571 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 CPNE9Q8IYJ1 553 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 SLC22A15Q8IZD6 547 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 MREGQ8N565 214 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 DEFB124Q8NES8 71 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 DCAKDQ8WVC6 231 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 TSPAN17Q96FV3 270 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 SLC32A1Q9H598 525 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 EVA1BQ9NVM1 165 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 CPNE7Q9UBL6 633 aa20.79■□□□□ 0.92
CASC4-204ENST00000557945 GOLGA4Q13439 2230 aaKnown RBP20.78■□□□□ 0.92
CASC4-204ENST00000557945 CPED1A4D0V7 1026 aa20.78■□□□□ 0.92
CASC4-204ENST00000557945 SLC30A4O14863 429 aa20.78■□□□□ 0.92
CASC4-204ENST00000557945 CBFA2T3O75081 653 aa20.78■□□□□ 0.92
CASC4-204ENST00000557945 VIPP01282 170 aa20.78■□□□□ 0.92
CASC4-204ENST00000557945 MTHFD1P11586 935 aaKnown RBP20.78■□□□□ 0.92
CASC4-204ENST00000557945 CD9P21926 228 aa20.78■□□□□ 0.92
CASC4-204ENST00000557945 SLC19A1P41440 591 aa20.78■□□□□ 0.92
CASC4-204ENST00000557945 ABRQ12979 859 aa20.78■□□□□ 0.92
CASC4-204ENST00000557945 DUS1LQ6P1R4 473 aaKnown RBP20.78■□□□□ 0.92
CASC4-204ENST00000557945 C17orf82Q86X59 251 aaPredicted RBP20.78■□□□□ 0.92
CASC4-204ENST00000557945 CFAP61Q8NHU2 1237 aa20.78■□□□□ 0.92
CASC4-204ENST00000557945 TFGQ92734 400 aaPredicted RBP20.78■□□□□ 0.92
CASC4-204ENST00000557945 STN1Q9H668 368 aaKnown RBP20.78■□□□□ 0.92
CASC4-204ENST00000557945 ZNF624Q9P2J8 865 aaPredicted RBP20.78■□□□□ 0.92
CASC4-204ENST00000557945 LY6G6EA0A0G2JKS1 128 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 SMIM23A6NLE4 172 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 RHPN2P1A8MT19 583 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 STMN1P16949 149 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 CKMT2P17540 419 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 RGS4P49798 205 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 DUSP3P51452 185 aaPredicted RBP20.77■□□□□ 0.92
CASC4-204ENST00000557945 HHEXQ03014 270 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 IFFO1Q0D2I5 559 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 GBX1Q14549 363 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 ZNF460Q14592 562 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 RSPO4Q2I0M5 234 aaPredicted RBP20.77■□□□□ 0.92
CASC4-204ENST00000557945 CEP97Q8IW35 865 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 FERD3LQ96RJ6 166 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 DHRS4Q9BTZ2 278 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 SLC24A2Q9UI40 661 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 ZNF180Q9UJW8 692 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 ASF1AQ9Y294 204 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 RNF215Q9Y6U7 377 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 U3KQA8 63 aa20.77■□□□□ 0.92
CASC4-204ENST00000557945 KRT38O76015 456 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 CBSLP0DN79 551 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 CKMT1AP12532 417 aa20.76■□□□□ 0.91
CASC4-204ENST00000557945 ENO3P13929 434 aaPredicted RBP20.76■□□□□ 0.91
CASC4-204ENST00000557945 XRCC1P18887 633 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms