RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TSPAN15O95858 294 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 WNT1P04628 370 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 OR2T7P0C7T2 308 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 SAGP10523 405 aaPredicted RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 NCF1P14598 390 aaPredicted RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 LBPP18428 481 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 CD22P20273 847 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 ACP1P24666 158 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 HSD17B3P37058 310 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 LHX1P48742 406 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 SULT1E1P49888 294 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 GBX2P52951 348 aaPredicted RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 MFAP3P55082 362 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 CSNK2A1P68400 391 aaPredicted RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 DLK1P80370 383 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 SLC25A3Q00325 362 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 CFHR1Q03591 330 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 GAD2Q05329 585 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 FOXM1Q08050 763 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 ELP6Q0PNE2 266 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 KARSQ15046 597 aaKnown RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 LBHQ53QV2 105 aaPredicted RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 RIPPLY2Q5TAB7 128 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 ALS2CLQ60I27 953 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 KCTD11Q693B1 232 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 MFSD12Q6NUT3 480 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 C1orf186Q6ZWK4 172 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 LPCAT2Q7L5N7 544 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 NRARPQ7Z6K4 114 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 SYVN1Q86TM6 617 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 GPR180Q86V85 440 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 MB21D2Q8IYB1 491 aaPredicted RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 RBFAQ8N0V3 343 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 LCORLQ8N3X6 602 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 RASGEF1CQ8N431 466 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 EMC1Q8N766 993 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 CSNK2A3Q8NEV1 391 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 RNASE8Q8TDE3 154 aaKnown RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 ERGIC1Q969X5 290 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 TMEM18Q96B42 140 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 SGF29Q96ES7 293 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 CDKN2AIPNLQ96HQ2 116 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 ZFYVE19Q96K21 471 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 PRMT6Q96LA8 375 aaPredicted RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 SEMA3CQ99985 751 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 NTPCRQ9BSD7 190 aaKnown RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 TRIM6Q9C030 488 aaPredicted RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 NPFFR1Q9GZQ6 430 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 RAB17Q9H0T7 212 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 ESRP2Q9H6T0 727 aaKnown RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 COQ10BQ9H8M1 238 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 MLXIPLQ9NP71 852 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 MYNNQ9NPC7 610 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 FANCFQ9NPI8 374 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 CENPMQ9NSP4 180 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.7□□□□□ -1.82
TDP1-217ENST00000557782 SOHLH2Q9NX45 425 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 TMOD2Q9NZR1 351 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 KLHL13Q9P2N7 655 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 UBQLN2Q9UHD9 624 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 ABT1Q9ULW3 272 aaKnown RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 GPR132Q9UNW8 380 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 EXOC6BQ9Y2D4 811 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 PADI2Q9Y2J8 665 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 U3KQV3 271 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 MAST3O60307 1309 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 MAGEA13PA6NCF6 341 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 CLDN3O15551 220 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 ATP9AO75110 1047 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 ATG13O75143 517 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 NME6O75414 186 aaPredicted RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 IDH1O75874 414 aaKnown RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 AK1P00568 194 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 PLGP00747 810 aaPredicted RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 HKR1P10072 659 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 HRH2P25021 359 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 DNAJB1P25685 340 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 PSMB4P28070 264 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 TKTP29401 623 aaKnown RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 IER3P46695 156 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 GMPSP49915 693 aaPredicted RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 HTR6P50406 440 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 MAPK12P53778 367 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 CACNA2D1P54289 1103 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 CDH12P55289 794 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 TMPRSS3P57727 454 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 ACTR1AP61163 376 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 TRA2BP62995 288 aaKnown RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 HSF1Q00613 529 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 ARHGAP1Q07960 439 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 CETN1Q12798 172 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 PPP1R8Q12972 351 aaKnown RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 GAGE2BQ13066 116 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 SGCGQ13326 291 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 PRKD1Q15139 912 aaPredicted RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 SYT16Q17RD7 645 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 MAJINQ3KP22 176 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 GAGE2EQ4V326 116 aa3.69□□□□□ -1.82
TDP1-217ENST00000557782 USP39Q53GS9 565 aaKnown RBP3.69□□□□□ -1.82
TDP1-217ENST00000557782 ARTNQ5T4W7 220 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms