RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 FKBPLQ9UIM3 349 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 POMT2Q9UKY4 750 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 VPS4AQ9UN37 437 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 MAP4K5Q9Y4K4 846 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 C5orf60A6NFR6 353 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 ANXA9O76027 345 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 CAPN1P07384 714 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 GNLYP22749 145 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 NDUFS1P28331 727 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 RORAP35398 523 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 PTGIRP43119 386 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 MARCKSL1P49006 195 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 ABRQ12979 859 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 OLIG2Q13516 323 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 GSE1Q14687 1217 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 BBS12Q6ZW61 710 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 CPT1BQ92523 772 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 CCM2Q9BSQ5 444 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 HEMGNQ9BXL5 484 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 TLR10Q9BXR5 811 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 NLNQ9BYT8 704 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 SOHLH2Q9NX45 425 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 NBPF19A0A087WUL8 3843 aa15.51■□□□□ 0.07
SCFD1-224ENST00000557713 TNRC6AQ8NDV7 1962 aaKnown RBP15.51■□□□□ 0.07
SCFD1-224ENST00000557713 C17orf113A0A1B0GUU1 675 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 APOC4-APOC2K7ER74 178 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 DDX3YO15523 660 aaKnown RBP15.5■□□□□ 0.07
SCFD1-224ENST00000557713 SORBS2O94875 1100 aaKnown RBP15.5■□□□□ 0.07
SCFD1-224ENST00000557713 LCA5LO95447 670 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 APOC2P02655 101 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 MSL3P1P0C860 447 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 CDH3P22223 829 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 PRDX3P30048 256 aaKnown RBP15.5■□□□□ 0.07
SCFD1-224ENST00000557713 MAGEA1P43355 309 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 PRKAA1Q13131 559 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 KRT33BQ14525 404 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 ZNF658BQ4V348 819 aaPredicted RBP15.5■□□□□ 0.07
SCFD1-224ENST00000557713 ZNF789Q5FWF6 425 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 CCDC50Q8IVM0 306 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 EFCAB3Q8N7B9 438 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 ENDOVQ8N8Q3 282 aaKnown RBP15.5■□□□□ 0.07
SCFD1-224ENST00000557713 ACVR1CQ8NER5 493 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 OR13C4Q8NGS5 318 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 OR1L3Q8NH93 324 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 RBM41Q96IZ5 413 aaKnown RBP15.5■□□□□ 0.07
SCFD1-224ENST00000557713 C19orf43Q9BQ61 176 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 APOL2Q9BQE5 337 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 SYTL2Q9HCH5 934 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 PCMTD2Q9NV79 361 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 TCFL5Q9UL49 500 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 PCDHGB7Q9Y5F8 929 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 HEBP2Q9Y5Z4 205 aa15.5■□□□□ 0.07
SCFD1-224ENST00000557713 H7C0C1 242 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 MATN2O00339 956 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 BTN3A3O00478 584 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 TMEM63AO94886 807 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 RALBP11234 206 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 ATP5OP48047 213 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 PRLHRP49683 370 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 TBX2Q13207 712 aaPredicted RBP15.49■□□□□ 0.07
SCFD1-224ENST00000557713 C4orf17Q53FE4 359 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 ANKRD20A2Q5SQ80 823 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 FHL5Q5TD97 284 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 ANKRD20A1Q5TYW2 823 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 FAM69BQ5VUD6 431 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 ANKRD20A3Q5VUR7 823 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 ITPRIPL1Q6GPH6 555 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 DENND5AQ6IQ26 1287 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 LURAP1LQ8IV03 231 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 CNGA4Q8IV77 575 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 NXPE1Q8N323 547 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 HM13Q8TCT9 377 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 LCN9Q8WX39 176 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 KRT35Q92764 455 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 ULK4Q96C45 1275 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 CLIP3Q96DZ5 547 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 DCUN1D1Q96GG9 259 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 FERD3LQ96RJ6 166 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 NRTNQ99748 197 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 PITPNM3Q9BZ71 974 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 SRMSQ9H3Y6 488 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 TFB2MQ9H5Q4 396 aaKnown RBP15.49■□□□□ 0.07
SCFD1-224ENST00000557713 FAM96AQ9H5X1 160 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 FANCEQ9HB96 536 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 CRLS1Q9UJA2 301 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 SNX7Q9UNH6 387 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 AAR2Q9Y312 384 aaKnown RBP15.49■□□□□ 0.07
SCFD1-224ENST00000557713 ZNF451Q9Y4E5 1061 aa15.49■□□□□ 0.07
SCFD1-224ENST00000557713 CCDC66A2RUB6 948 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 AKR1B15C9JRZ8 316 aaPredicted RBP15.48■□□□□ 0.07
SCFD1-224ENST00000557713 CRTAMO95727 393 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 ATP1B2P14415 290 aaPredicted RBP15.48■□□□□ 0.07
SCFD1-224ENST00000557713 ST6GAL1P15907 406 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 PREPP48147 710 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 ITGA1P56199 1179 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 FAM198BQ6UWH4 519 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 SNX20Q7Z614 316 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 ZBTB2Q8N680 514 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 PHC3Q8NDX5 983 aa15.48■□□□□ 0.07
SCFD1-224ENST00000557713 FDCSPQ8NFU4 85 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms