RNA–Protein interactions for RNA: ENST00000557709.1

AL162872.1-201, humanhuman

TSL 3 BASIC

Gene AL162872.1, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL162872.1-201ENST00000557709 SNX9Q9Y5X1 595 aa4.42□□□□□ -1.7
AL162872.1-201ENST00000557709 U3KQA8 63 aa4.42□□□□□ -1.7
AL162872.1-201ENST00000557709 ARHGEF17Q96PE2 2063 aaPredicted RBP4.42□□□□□ -1.7
AL162872.1-201ENST00000557709 HIVEP3Q5T1R4 2406 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 TARSL2A2RTX5 802 aaKnown RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 CCDC151A5D8V7 595 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 NEMP2A6NFY4 417 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 LINC00473A8K010 186 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 TCP11X1B4DZS4 312 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 SLC31A1O15431 190 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 DUX1O43812 170 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 SNX2O60749 519 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 CNTN5O94779 1100 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 OLFM2O95897 454 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 GP1BAP07359 652 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 GIMD1P0DJR0 217 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 LIFP15018 202 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 PECAM1P16284 738 aaPredicted RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 GCFC2P16383 781 aaKnown RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 RBL1P28749 1068 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 SLC8A1P32418 973 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 ETV5P41161 510 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 GRIA3P42263 894 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 PPP3CCP48454 512 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 NUMBP49757 651 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 LIG4P49917 911 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 ZNF132P52740 706 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 TPTEP56180 551 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 TFAMQ00059 246 aaKnown RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 KRT72Q14CN4 511 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 ZRSR1Q15695 479 aaKnown RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 MAPKAPK3Q16644 382 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 GRAMD1BQ3KR37 738 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 CFAP221Q4G0U5 840 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 PLAC9Q5JTB6 97 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 ATP1A1-AS1Q5TC04 95 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 NUGGCQ68CJ6 796 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 ZNF776Q68DI1 518 aaPredicted RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 PGBD2Q6P3X8 592 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 DPY19L3Q6ZPD9 716 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 C4orf50Q6ZRC1 276 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 ASB18Q6ZVZ8 466 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 ZNF551Q7Z340 670 aaPredicted RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 TIPARPQ7Z3E1 657 aaKnown RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 ANKS1BQ7Z6G8 1248 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 CCDC83Q8IWF9 413 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 NUP93Q8N1F7 819 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 CSGALNACT2Q8N6G5 542 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 Q8N9G6 341 aaPredicted RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 OR2T34Q8NGX1 318 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 MBD3L2Q8NHZ7 208 aaPredicted RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 NOC3LQ8WTT2 800 aaKnown RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 SLC9A6Q92581 669 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 KCNK16Q96T55 309 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 PKMYT1Q99640 499 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 CCDC3Q9BQI4 270 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 SYT15Q9BQS2 421 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 DPCDQ9BVM2 203 aaPredicted RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 RNF26Q9BY78 433 aaPredicted RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 STRADBQ9C0K7 418 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 PABPC3Q9H361 631 aaKnown RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 TUFT1Q9NNX1 390 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 EHD2Q9NZN4 543 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 UNC13CQ8NB66 2214 aa4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 DIDO1Q9BTC0 2240 aaKnown RBP4.41□□□□□ -1.7
AL162872.1-201ENST00000557709 E9PMD0 336 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 PSMD9O00233 223 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 IFRD1O00458 451 aaPredicted RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 NPC1O15118 1278 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 SCAMP1O15126 338 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 OGTO15294 1046 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 NVLO15381 856 aaKnown RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 TIMM44O43615 452 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 CCNT2O60583 730 aaKnown RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 MAGEC1O60732 1142 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 RNASEH1O60930 286 aaKnown RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 TCEA3O75764 348 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 LDLRP01130 860 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 EBLN1P0CF75 366 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 PRLRP16471 622 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 PDIA3P30101 505 aaKnown RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 CCT6AP40227 531 aaKnown RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 MAGEA11P43364 429 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 PSMD8P48556 350 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 LHX1P48742 406 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 ELLP55199 621 aaPredicted RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 CLDN2P57739 230 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 CCL7P80098 99 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 NSUN2Q08J23 767 aaKnown RBP eCLIP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 C1orf61Q13536 156 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 ENPP2Q13822 863 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 TRIM14Q14142 442 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 ZNF169Q14929 603 aaPredicted RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 NECTIN1Q15223 517 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 PRR30Q53SZ7 412 aaPredicted RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 ZNF362Q5T0B9 420 aaPredicted RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 TMTC4Q5T4D3 741 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 ARL6IP4Q66PJ3 421 aaKnown RBP4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 ABLIM2Q6H8Q1 611 aa4.4□□□□□ -1.71
AL162872.1-201ENST00000557709 OR6B2Q6IFH4 312 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms