RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CD300LGQ6UXG3 332 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 GLT6D1Q7Z4J2 308 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 CADM3Q8N126 398 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 FAR1Q8WVX9 515 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 GLMNQ92990 594 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 TRIT1Q9H3H1 467 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 ATP13A3Q9H7F0 1226 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 NUDT4Q9NZJ9 180 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 AP3M1Q9Y2T2 418 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 SPO11Q9Y5K1 396 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 TDRD15B5MCY1 1934 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 MOXD2PA6NHM9 499 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 DRGXA6NNA5 263 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 BCKDKO14874 412 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 NIPSNAP2O75323 286 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 CD9P21926 228 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 PAX3P23760 479 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 BEX3Q00994 111 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 CDK5R2Q13319 367 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 KIAA0040Q15053 153 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 TAF1AQ15573 450 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 INAQ16352 499 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 NEK10Q6ZWH5 1172 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 ADCK1Q86TW2 530 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 CIR1Q86X95 450 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 HIPK1Q86Z02 1210 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 ZCCHC7Q8N3Z6 543 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 ARL10Q8N8L6 244 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 NUDT8Q8WV74 236 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 RMDN1Q96DB5 314 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC10A4Q96EP9 437 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 PPP3R2Q96LZ3 170 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 TRIB3Q96RU7 358 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 HBEGFQ99075 208 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 FBXO8Q9NRD0 319 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 UTS2RQ9UKP6 389 aa11.63□□□□□ -0.55
VIPAS39-211ENST00000557658 C2orf81A6NN90 581 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 ANGPTL1O95841 491 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 HOXB6P17509 224 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 PRKACGP22612 351 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 TGM1P22735 817 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 TTPAP49638 278 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 IL5RAQ01344 420 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 MAPKAPK3Q16644 382 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 AAK1Q2M2I8 961 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 RFTN2Q52LD8 501 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 PAGE2BQ5JRK9 111 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 MRPL10Q7Z7H8 261 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 DCP2Q8IU60 420 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 MFSD4AQ8N468 514 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 SETD9Q8NE22 299 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 CD200R1Q8TD46 325 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 MCOLN3Q8TDD5 553 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 FRS2Q8WU20 508 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 GTF2H4Q92759 462 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 NCLNQ969V3 563 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 AP5M1Q9H0R1 490 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 FBXO44Q9H4M3 255 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 MAGIXQ9H6Y5 334 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 EXD2Q9NVH0 621 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 ZNF232Q9UNY5 417 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 EIF3LQ9Y262 564 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC45A1Q9Y2W3 748 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 TNPO3Q9Y5L0 923 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 M0QX08 132 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 XPNPEP2O43895 674 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 RETP07949 1114 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 ITGAMP11215 1152 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC2A4P14672 509 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 TYMPP19971 482 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 HOXC8P31273 242 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 GRK3P35626 688 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 MAPKAPK2P49137 400 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 IFITM3Q01628 133 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 PPP1R8Q12972 351 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 PCBP2Q15366 365 aaKnown RBP eCLIP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 ADPRMQ3LIE5 342 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC39A12Q504Y0 691 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 C1QTNF12Q5T7M4 302 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 SDHAF4Q5VUM1 108 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 GOLGA7Q7Z5G4 137 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 TMEM179BQ7Z7N9 219 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 GALNT13Q8IUC8 556 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 MICU2Q8IYU8 434 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 ABI1Q8IZP0 508 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 CHCHD4Q8N4Q1 142 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 OR4F6Q8NGB9 312 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 OR6Q1Q8NGQ2 317 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 NDNFQ8TB73 568 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 FBLIM1Q8WUP2 373 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 HPS1Q92902 700 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 POP5Q969H6 163 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 RHBDF1Q96CC6 855 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 TBCDQ9BTW9 1192 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 SPC25Q9HBM1 224 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 ABI2Q9NYB9 513 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 INTS6Q9UL03 887 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 INVSQ9Y283 1065 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 TPRKBQ9Y3C4 175 aa11.62□□□□□ -0.55
VIPAS39-211ENST00000557658 E5RI56 91 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms