RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 EIF4E1BA6NMX2 242 aaKnown RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 C2orf81A6NN90 581 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 C4orf47A7E2U8 309 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 HEPACAM2A8MVW5 462 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 SLC30A4O14863 429 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 EGFP01133 1207 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 CCDC175P0C221 793 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 CYP19A1P11511 503 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 IL7RP16871 459 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 ITGB8P26012 769 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 PIGAP37287 484 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 LMAN1P49257 510 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 PDLIM4P50479 330 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 PITX1P78337 314 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 IRX1P78414 480 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 ITGA7Q13683 1181 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 KIR2DS5Q14953 304 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 CTF1Q16619 201 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 BOLA3Q53S33 107 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 SPOUT1Q5T280 376 aaKnown RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 DUS1LQ6P1R4 473 aaKnown RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 B3GNT6Q6ZMB0 384 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 LCA5Q86VQ0 697 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 SPATA2LQ8IUW3 424 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 LINC00346Q8IVM7 164 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF34Q8IZ26 560 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 RNF113BQ8IZP6 322 aaKnown RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 TC2NQ8N9U0 490 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 PHOSPHO2Q8TCD6 241 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF653Q96CK0 615 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 ORAI1Q96D31 301 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 THOC1Q96FV9 657 aaKnown RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 ABHD8Q96I13 439 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 TRIM6Q9C030 488 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 TRPV4Q9HBA0 871 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 FBXL2Q9UKC9 423 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 RRP15Q9Y3B9 282 aaKnown RBP1.65□□□□□ -2.14
HIF1A-212ENST00000557538 GRIP1Q9Y3R0 1128 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 C2CD2Q9Y426 696 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 LOXL2Q9Y4K0 774 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 IKBKGQ9Y6K9 419 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 CKAP5Q14008 2032 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 A0A1B0GVT2 93 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 TRBC2A0A5B9 178 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 ASPDHA6ND91 283 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 OVOL3O00110 214 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 SOCS6O14544 535 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 ACOT8O14734 319 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 LDB3O75112 727 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 PAHP00439 452 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 IGHV4-39P01824 125 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 PRSS2P07478 247 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CLTBP09497 229 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 MMP9P14780 707 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 NR2C2P49116 596 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 RAB28P51157 221 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 MLLT10P55197 1068 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CLDN15P56746 228 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 DSCR9P59020 149 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 NANOS2P60321 138 aaKnown RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 POU3F1Q03052 451 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 MECOMQ03112 1051 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 PPIGQ13427 754 aaKnown RBP eCLIP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 GTF2H2Q13888 395 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 IDI1Q13907 227 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 DHX34Q14147 1143 aaKnown RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 DLG2Q15700 870 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 XKR9Q5GH70 373 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CCDC122Q5T0U0 273 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 GTF2H2CQ6P1K8 395 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 DENND5BQ6ZUT9 1274 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 ERN2Q76MJ5 926 aaKnown RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CATSPER4Q7RTX7 472 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 DGLUCYQ7Z3D6 616 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM219Q86XT9 240 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 PGBD5Q8N414 524 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 RASGEF1CQ8N431 466 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 TANKQ92844 425 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 DHTKD1Q96HY7 919 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 TXNDC15Q96J42 360 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 FAM81BQ96LP2 452 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 RAB3IPQ96QF0 476 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CENPOQ9BU64 300 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 PIGMQ9H3S5 423 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 NOL11Q9H8H0 719 aaKnown RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 TCP11L1Q9NUJ3 509 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CTNNAL1Q9UBT7 734 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 LEF1Q9UJU2 399 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 YIPF1Q9Y548 306 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 TNFRSF18Q9Y5U5 241 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 A0A1W2PN81 502 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 OR5K3A6NET4 321 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 TO15178 435 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 VPREB1P12018 145 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 HLA-DOBP13765 273 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 SSTR2P30874 369 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 CHRNA7P36544 502 aa1.65□□□□□ -2.15
HIF1A-212ENST00000557538 ARCN1P48444 511 aaKnown RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 SARNPP82979 210 aaKnown RBP1.65□□□□□ -2.15
HIF1A-212ENST00000557538 MAT1AQ00266 395 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms