RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 MARC1Q5VT66 337 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 CACHD1Q5VU97 1274 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 SLC6A19Q695T7 634 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 PWWP2BQ6NUJ5 590 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 FAM199XQ6PEV8 388 aaPredicted RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 VHLLQ6RSH7 139 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 CRTC3Q6UUV7 619 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 FAM92BQ6ZTR7 304 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 PPP1R3BQ86XI6 285 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 TRIM48Q8IWZ4 208 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 BBS5Q8N3I7 341 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ATPAF2Q8N5M1 289 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 AOPEPQ8N6M6 819 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 COG1Q8WTW3 980 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 THAP4Q8WY91 577 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 KLHL6Q8WZ60 621 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 SEC14L1Q92503 715 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 C19orf60Q96EN9 201 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 TM9SF2Q99805 663 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 AGPAT1Q99943 283 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 GPR87Q9BY21 358 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 SLC29A3Q9BZD2 475 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 TRIM7Q9C029 511 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 OR2AG1Q9H205 316 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 OSGEPL1Q9H4B0 414 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ZWILCHQ9H900 591 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 RMI1Q9H9A7 625 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 TCF7L1Q9HCS4 588 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ARFGAP3Q9NP61 516 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 NT5MQ9NPB1 228 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 SLAMF7Q9NQ25 335 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ACSS2Q9NR19 701 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 KLC4Q9NSK0 619 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 TAS2R14Q9NYV8 317 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF624Q9P2J8 865 aaPredicted RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 SIK3Q9Y2K2 1263 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF451Q9Y4E5 1061 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 PCDHB14Q9Y5E9 798 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 NF1P21359 2839 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 F8P00451 2351 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 TRBV23-1A0A0A0MS06 115 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 IGHV5-51A0A0C4DH38 117 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 C1orf232A0A0U1RR37 186 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 TMEM191CA6NGB0 347 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 OR52A4PA6NMU1 304 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PRSS47A8MTI9 375 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PDZK1P1A8MUH7 402 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 TMCO5BA8MYB1 307 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 F5H423 210 aaPredicted RBP5.73□□□□□ -1.49
VPS33B-207ENST00000557470 H3BRJ5 948 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 DPM1O60762 260 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 CEACAM4O75871 244 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 DNAJC8O75937 253 aaPredicted RBP5.73□□□□□ -1.49
VPS33B-207ENST00000557470 SASH3O75995 380 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 CBX6O95503 412 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PRLP01236 227 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 VIPP01282 170 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PF4V1P10720 104 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 RBP3P10745 1247 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 BRAFP15056 766 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 TCF4P15884 667 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 LPOP22079 712 aaPredicted RBP5.73□□□□□ -1.49
VPS33B-207ENST00000557470 IL1R2P27930 398 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 SPINT3P49223 89 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 CLCNKAP51800 687 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF135P52742 658 aaPredicted RBP5.73□□□□□ -1.49
VPS33B-207ENST00000557470 CDH6P55285 790 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 RIPPLY3P57055 190 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 RPS15P62841 145 aaKnown RBP5.73□□□□□ -1.49
VPS33B-207ENST00000557470 DSC2Q02487 901 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PLAURQ03405 335 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 GPR18Q14330 331 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 KRT31Q15323 416 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 SMTNL2Q2TAL5 461 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 FAM69BQ5VUD6 431 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PLEKHA7Q6IQ23 1121 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 ACAD10Q6JQN1 1059 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 IRGCQ6NXR0 463 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 MZT2AQ6P582 158 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 TMCO3Q6UWJ1 677 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 CERS6Q6ZMG9 384 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 MAATS1Q7Z4T9 603 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 POLNQ7Z5Q5 900 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 KRT77Q7Z794 578 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 SYVN1Q86TM6 617 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PSTKQ8IV42 348 aaKnown RBP5.73□□□□□ -1.49
VPS33B-207ENST00000557470 SCUBE1Q8IWY4 988 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 NDUFAF2Q8N183 169 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 TTC30BQ8N4P2 665 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 TEX26Q8N6G2 289 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 RBMXL3Q8N7X1 1067 aaKnown RBP5.73□□□□□ -1.49
VPS33B-207ENST00000557470 ACRBPQ8NEB7 543 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 FDCSPQ8NFU4 85 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 ADAMTS17Q8TE56 1095 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 NSMCE1Q8WV22 266 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 PNPLA2Q96AD5 504 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 ZDHHC12Q96GR4 267 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 SLC41A2Q96JW4 573 aa5.73□□□□□ -1.49
VPS33B-207ENST00000557470 C5orf34Q96MH7 638 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms