RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 DYRK4Q9NR20 520 aa12.44□□□□□ -0.42
SHMT2-229ENST00000557348 PCTPQ9UKL6 214 aa12.44□□□□□ -0.42
SHMT2-229ENST00000557348 PPM1HQ9ULR3 514 aa12.44□□□□□ -0.42
SHMT2-229ENST00000557348 AK5Q9Y6K8 562 aa12.44□□□□□ -0.42
SHMT2-229ENST00000557348 SCN8AQ9UQD0 1980 aa12.44□□□□□ -0.42
SHMT2-229ENST00000557348 A0A0U1RQS6 177 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 SLC16A5O15375 505 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 C8GP07360 202 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 ELFN1P0C7U0 828 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 MPC1LP0DKB6 136 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 PSMC3P17980 439 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 PIK3R1P27986 724 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 NUP107P57740 925 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 FOLH1Q04609 750 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 HENMT1Q5T8I9 393 aaKnown RBP12.43□□□□□ -0.42
SHMT2-229ENST00000557348 IRAK1BP1Q5VVH5 260 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 FAM46CQ5VWP2 391 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 C12orf40Q86WS4 652 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 FBXW8Q8N3Y1 598 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 VPS50Q96JG6 964 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 BOCQ9BWV1 1114 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 TMEM45AQ9NWC5 275 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 GALPQ9UBC7 116 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 DTNAQ9Y4J8 743 aa12.43□□□□□ -0.42
SHMT2-229ENST00000557348 A8MX80 341 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 KPNA3O00505 521 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-229ENST00000557348 WNT9AO14904 365 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 TRIM24O15164 1050 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 VILLO15195 856 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 FFAR2O15552 330 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 NUAK1O60285 661 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 OTCP00480 354 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 TFAP2AP05549 437 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 CTSLP07711 333 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GSTM1P09488 218 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 SMIM18P0DKX4 95 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 MSH3P20585 1137 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 AKT1P31749 480 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GRIA2P42262 883 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 MTTPP55157 894 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 PHEXP78562 749 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GSTM4Q03013 218 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 STX5Q13190 355 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 APOFQ13790 326 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 PPP1R3AQ16821 1122 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GAB4Q2WGN9 574 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 SBSNQ6UWP8 590 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 SERPINA13PQ6UXR4 307 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 NLRP8Q86W28 1048 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 ZBTB8BQ8NAP8 495 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-229ENST00000557348 TWIST2Q8WVJ9 160 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 SORCS1Q8WY21 1168 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 SUSD6Q92537 303 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 MAGEB10Q96LZ2 347 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-229ENST00000557348 HGH1Q9BTY7 390 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 IGFLR1Q9H665 355 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 EPHX3Q9H6B9 360 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 HPS4Q9NQG7 708 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 RIC8BQ9NVN3 520 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 COLQQ9Y215 455 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GBF1Q92538 1859 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 A0A0J9YVX5 310 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 TBC1D3BA6NDS4 549 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 IQCF5A8MTL0 148 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 TMEM233B4DJY2 109 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 UBFD1O14562 309 aaKnown RBP12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GPR39O43194 453 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 SIX3O95343 332 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-229ENST00000557348 ANXA5P08758 320 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 PCSK2P16519 638 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 MTHFRP42898 656 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 CD97P48960 835 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 HNMTP50135 292 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 SH3BP2P78314 561 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 TBL3Q12788 808 aaKnown RBP12.42□□□□□ -0.42
SHMT2-229ENST00000557348 RALGDSQ12967 914 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GRIK2Q13002 908 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GBX1Q14549 363 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 RBBP7Q16576 425 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 UGT3A2Q3SY77 523 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 SFT2D3Q587I9 215 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 HABP4Q5JVS0 413 aaKnown RBP12.42□□□□□ -0.42
SHMT2-229ENST00000557348 FBXL19Q6PCT2 694 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 VITQ6UXI7 678 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 LIPIQ6XZB0 460 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 RNF165Q6ZSG1 346 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GPRIN3Q6ZVF9 776 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 MTSS1LQ765P7 747 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 TECPR1Q7Z6L1 1165 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 PHYKPLQ8IUZ5 450 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 PQLC1Q8N2U9 271 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 PHTF2Q8N3S3 785 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 CLDN19Q8N6F1 224 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 BTN2A2Q8WVV5 523 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 ASZ1Q8WWH4 475 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 LENG8Q96PV6 779 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-229ENST00000557348 GDF15Q99988 308 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 TMEM245Q9H330 911 aa12.42□□□□□ -0.42
SHMT2-229ENST00000557348 EFCAB1Q9HAE3 211 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms