RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZNF501Q96CX3 271 aaPredicted RBP15.48■□□□□ 0.07
TUBB3-213ENST00000557262 RMDN2Q96LZ7 410 aa15.48■□□□□ 0.07
TUBB3-213ENST00000557262 PANX2Q96RD6 677 aa15.48■□□□□ 0.07
TUBB3-213ENST00000557262 COPS8Q99627 209 aa15.48■□□□□ 0.07
TUBB3-213ENST00000557262 FAM118BQ9BPY3 351 aa15.48■□□□□ 0.07
TUBB3-213ENST00000557262 TBL1YQ9BQ87 522 aa15.48■□□□□ 0.07
TUBB3-213ENST00000557262 ACTL8Q9H568 366 aa15.48■□□□□ 0.07
TUBB3-213ENST00000557262 FAM96AQ9H5X1 160 aa15.48■□□□□ 0.07
TUBB3-213ENST00000557262 FEZ2Q9UHY8 353 aaPredicted RBP15.48■□□□□ 0.07
TUBB3-213ENST00000557262 TLK1Q9UKI8 766 aa15.48■□□□□ 0.07
TUBB3-213ENST00000557262 SOWAHDA6NJG2 315 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 CYSRT1A8MQ03 144 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 BTNL10A8MVZ5 291 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 K7EM74 188 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 CPNE3O75131 537 aaKnown RBP15.47■□□□□ 0.07
TUBB3-213ENST00000557262 RFPL1O75677 317 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 SCRG1O75711 98 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 ZNF189O75820 626 aaPredicted RBP15.47■□□□□ 0.07
TUBB3-213ENST00000557262 IPO7O95373 1038 aaKnown RBP15.47■□□□□ 0.07
TUBB3-213ENST00000557262 POLR2CP19387 275 aaPredicted RBP15.47■□□□□ 0.07
TUBB3-213ENST00000557262 PTPN4P29074 926 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 PRLHRP49683 370 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 KPNA2P52292 529 aaKnown RBP15.47■□□□□ 0.07
TUBB3-213ENST00000557262 ZNF140P52738 457 aaPredicted RBP15.47■□□□□ 0.07
TUBB3-213ENST00000557262 PMS2P54278 862 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 SPARCL1Q14515 664 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 GPR19Q15760 415 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 TMEM126BQ8IUX1 230 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 TEX19Q8NA77 164 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 ACVR1CQ8NER5 493 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 FERD3LQ96RJ6 166 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 C1GALT1Q9NS00 363 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 ZDHHC3Q9NYG2 299 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 FARSAQ9Y285 508 aaKnown RBP15.47■□□□□ 0.07
TUBB3-213ENST00000557262 BTRCQ9Y297 605 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 MAN2B2Q9Y2E5 1009 aa15.47■□□□□ 0.07
TUBB3-213ENST00000557262 MATN2O00339 956 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 LDB2O43679 373 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 KLK3P07288 261 aaPredicted RBP15.46■□□□□ 0.07
TUBB3-213ENST00000557262 ARCN1P48444 511 aaKnown RBP15.46■□□□□ 0.07
TUBB3-213ENST00000557262 SEMA5AQ13591 1074 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 UGT8Q16880 541 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 PARP6Q2NL67 630 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 AADACL2Q6P093 401 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 FBXO38Q6PIJ6 1188 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 ASB18Q6ZVZ8 466 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 SYVN1Q86TM6 617 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 KLHDC8BQ8IXV7 354 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 LCN9Q8WX39 176 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 THAP4Q8WY91 577 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 ALG3Q92685 438 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 PPM1MQ96MI6 270 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 RUFY1Q96T51 708 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 SRMSQ9H3Y6 488 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 LATS2Q9NRM7 1088 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 SOHLH2Q9NX45 425 aa15.46■□□□□ 0.07
TUBB3-213ENST00000557262 IGLV3-16A0A075B6K0 115 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 TRBV5-4A0A0C4DH59 114 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 SLC9B1P1A6NJY1 282 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 IFRD1O00458 451 aaPredicted RBP15.45■□□□□ 0.06
TUBB3-213ENST00000557262 NR1D1P20393 614 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 CDH3P22223 829 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 MC4RP32245 332 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 CD151P48509 253 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 CDKN1CP49918 316 aaPredicted RBP15.45■□□□□ 0.06
TUBB3-213ENST00000557262 GSDMDP57764 484 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 UBAP2LQ14157 1087 aaKnown RBP15.45■□□□□ 0.06
TUBB3-213ENST00000557262 ZNF449Q6P9G9 518 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 ZNF517Q6ZMY9 492 aaPredicted RBP15.45■□□□□ 0.06
TUBB3-213ENST00000557262 TTC13Q8NBP0 860 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 SLC38A9Q8NBW4 561 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 MR1Q95460 341 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 LRFN5Q96NI6 719 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 LACRTQ9GZZ8 138 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 OR52A5Q9H2C5 316 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 COG4Q9H9E3 785 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 SYTL2Q9HCH5 934 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 POMT2Q9UKY4 750 aa15.45■□□□□ 0.06
TUBB3-213ENST00000557262 NBASA2RRP1 2371 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 PTPN13Q12923 2485 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 MAST4O15021 2626 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 GOLGA6L9A6NEM1 432 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 H7C0S8 307 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 CCL22O00626 93 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 MAP3K7O43318 606 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 TPH1P17752 444 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 ACRV1P26436 265 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 PRDX3P30048 256 aaKnown RBP15.44■□□□□ 0.06
TUBB3-213ENST00000557262 RPS18P62269 152 aaKnown RBP15.44■□□□□ 0.06
TUBB3-213ENST00000557262 RPA4Q13156 261 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 GPS2Q13227 327 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 ZNF658BQ4V348 819 aaPredicted RBP15.44■□□□□ 0.06
TUBB3-213ENST00000557262 ZRANB3Q5FWF4 1079 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 IZUMO3Q5VZ72 239 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 KCTD11Q693B1 232 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 ARHGEF18Q6ZSZ5 1173 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 TAS2R42Q7RTR8 314 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 SERPINA9Q86WD7 417 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 LRRC57Q8N9N7 239 aa15.44■□□□□ 0.06
TUBB3-213ENST00000557262 PHC3Q8NDX5 983 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms