RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 MPSTP25325 297 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 CSF2RBP32927 897 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 RPL21P46778 160 aaKnown RBP10.43□□□□□ -0.74
LINC00239-201ENST00000556973 PREPP48147 710 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 ARL4CP56559 192 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 C2orf54Q08AI8 447 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 CALCOCO2Q13137 446 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 CBLBQ13191 982 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 BRD3Q15059 726 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 ST3GAL2Q16842 350 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 TBC1D25Q3MII6 688 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 MSS51Q4VC12 460 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 SYTL3Q4VX76 610 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 SPANXN3Q5MJ09 141 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 FOXR1Q6PIV2 292 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 CILP2Q8IUL8 1156 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.43□□□□□ -0.74
LINC00239-201ENST00000556973 PHC3Q8NDX5 983 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 ACVR1CQ8NER5 493 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 GABPB2Q8TAK5 448 aaPredicted RBP10.43□□□□□ -0.74
LINC00239-201ENST00000556973 ZNF592Q92610 1267 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 TFGQ92734 400 aaPredicted RBP10.43□□□□□ -0.74
LINC00239-201ENST00000556973 FGF11Q92914 225 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 ZDHHC12Q96GR4 267 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 CCDC74BQ96LY2 380 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 RMDN2Q96LZ7 410 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 TRIM31Q9BZY9 425 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 ZMYND15Q9H091 742 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 KIR3DX1Q9H7L2 352 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 C20orf96Q9NUD7 363 aaPredicted RBP10.43□□□□□ -0.74
LINC00239-201ENST00000556973 OGFRQ9NZT2 677 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 TMEM9Q9P0T7 183 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 SLC24A2Q9UI40 661 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 SNX24Q9Y343 169 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 LOXL2Q9Y4K0 774 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 IQCF5A8MTL0 148 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 A8MU76 341 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 BHMG1C9JSJ3 638 aaPredicted RBP10.42□□□□□ -0.74
LINC00239-201ENST00000556973 H3BMM5 538 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 TAF4O00268 1085 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 TP73O15350 636 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 TOX3O15405 576 aaPredicted RBP10.42□□□□□ -0.74
LINC00239-201ENST00000556973 CAPN5O15484 640 aaPredicted RBP10.42□□□□□ -0.74
LINC00239-201ENST00000556973 RAD51CO43502 376 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 GPC4O75487 556 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 TNFSF15O95150 251 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 C9P02748 559 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 ESR1P03372 595 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 ITGA2BP08514 1039 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 JMJD7P0C870 316 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 AOAHP28039 575 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 ACADLP28330 430 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 FMO4P31512 558 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 CSTF2P33240 577 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC00239-201ENST00000556973 EIF3BP55884 814 aaKnown RBP10.42□□□□□ -0.74
LINC00239-201ENST00000556973 HSPA14Q0VDF9 509 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 BOP1Q14137 746 aaKnown RBP10.42□□□□□ -0.74
LINC00239-201ENST00000556973 C16orf72Q14CZ0 275 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 PLCL1Q15111 1095 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 HIF1AQ16665 826 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 WHAMMP3Q1A5X7 153 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 BBS9Q3SYG4 887 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 SNAP47Q5SQN1 464 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 NAPRTQ6XQN6 538 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 CENPUQ71F23 418 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 ARHGAP22Q7Z5H3 698 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 PDZD3Q86UT5 571 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 KRT222Q8N1A0 295 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 AGBL5Q8NDL9 886 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 RCBTB1Q8NDN9 531 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 LPGAT1Q92604 370 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 C9orf72Q96LT7 481 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 BIRC8Q96P09 236 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 B3GNT4Q9C0J1 378 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 TFB2MQ9H5Q4 396 aaKnown RBP10.42□□□□□ -0.74
LINC00239-201ENST00000556973 MVB12BQ9H7P6 319 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 ASCL3Q9NQ33 180 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 LATS2Q9NRM7 1088 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 THSD1Q9NS62 852 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 IL1RAPL1Q9NZN1 696 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 WHRNQ9P202 907 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 EPHA6Q9UF33 1036 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 POLG2Q9UHN1 485 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 CRYL1Q9Y2S2 319 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 UTP11Q9Y3A2 253 aaKnown RBP10.42□□□□□ -0.74
LINC00239-201ENST00000556973 TEX264Q9Y6I9 313 aa10.42□□□□□ -0.74
LINC00239-201ENST00000556973 MN1Q10571 1320 aaPredicted RBP10.41□□□□□ -0.74
LINC00239-201ENST00000556973 SRRM3A6NNA2 597 aaPredicted RBP10.41□□□□□ -0.74
LINC00239-201ENST00000556973 CDRT15L2A8MXV6 281 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 NVLO15381 856 aaKnown RBP10.41□□□□□ -0.74
LINC00239-201ENST00000556973 SLCO2B1O94956 709 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 ANKRD34CP0C6C1 535 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 HGFP14210 728 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 PKMP14618 531 aaKnown RBP10.41□□□□□ -0.74
LINC00239-201ENST00000556973 ITGB6P18564 788 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 CHRM3P20309 590 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 ELK3P41970 407 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 CAPZBP47756 277 aa10.41□□□□□ -0.74
LINC00239-201ENST00000556973 MRPS25P82663 173 aaKnown RBP10.41□□□□□ -0.74
LINC00239-201ENST00000556973 CTBP1Q13363 440 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms