RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 PSMD13Q9UNM6 376 aa17.05■□□□□ 0.32
TUBB3-211ENST00000556536 CSNK1G3Q9Y6M4 447 aa17.05■□□□□ 0.32
TUBB3-211ENST00000556536 KNL1Q8NG31 2342 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 CHD8Q9HCK8 2581 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 CHD6Q8TD26 2715 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 PDZK1P1A8MUH7 402 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 FOXO6A8MYZ6 492 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 KPNA5O15131 536 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 WISP3O95389 354 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 ALDOAP04075 364 aaKnown RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 ANXA6P08133 673 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 SNRPAP09012 282 aaKnown RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 CNTFP26441 200 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 GMPRP36959 345 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 SKIV2L2P42285 1042 aaKnown RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 SLC12A2P55011 1212 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 RAB10P61026 200 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 PDAP1Q13442 181 aaKnown RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 TMED2Q15363 201 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 AASDHQ4L235 1098 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 UGT3A1Q6NUS8 523 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 TAOK1Q7L7X3 1001 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 SPDYE1Q8NFV5 336 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 MZB1Q8WU39 189 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 ASZ1Q8WWH4 475 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 TMEM159Q96B96 161 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 TSPAN17Q96FV3 270 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 ROPN1BQ9BZX4 212 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 OR52A5Q9H2C5 316 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 ROPN1Q9HAT0 212 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 SNX15Q9NRS6 342 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 ACSL5Q9ULC5 683 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 DOLKQ9UPQ8 538 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 BAHCC1Q9P281 2608 aa17.04■□□□□ 0.32
TUBB3-211ENST00000556536 MAP1BP46821 2468 aaKnown RBP17.04■□□□□ 0.32
TUBB3-211ENST00000556536 USP24Q9UPU5 2620 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 TRBV23OR9-2A0A075B6M9 112 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-211ENST00000556536 B4DGG1 531 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 TRIM38O00635 465 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 TPP1O14773 563 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 PCDHGA12O60330 932 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 GDF9O60383 454 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 CDH16O75309 829 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 SLCO2B1O94956 709 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 ZNF883P0CG24 379 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 STMN1P16949 149 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 SERPINB8P50452 374 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 CSRP3P50461 194 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 RPA4Q13156 261 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 CLCA4Q14CN2 919 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 RASA2Q15283 850 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 TTLL9Q3SXZ7 439 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 LGSNQ5TDP6 509 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 AGAP9Q5VTM2 703 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 LRIG3Q6UXM1 1119 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 SLC22A15Q8IZD6 547 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 SDR16C5Q8N3Y7 309 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 EEF1AKMT1Q8WVE0 214 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 ANKRD49Q8WVL7 239 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 PATE1Q8WXA2 126 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 GLMNQ92990 594 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 RMDN2Q96LZ7 410 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 DPEP2Q9H4A9 486 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 POPDC3Q9HBV1 291 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 TMEM9BQ9NQ34 198 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 PCOLCE2Q9UKZ9 415 aa17.03■□□□□ 0.32
TUBB3-211ENST00000556536 IQANK1A0A1B0GTG1 560 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 NEMP2A6NFY4 417 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 FOXD2O60548 495 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-211ENST00000556536 TSPAN12O95859 305 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 SLC35E2BP0CK96 405 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 CRABP2P29373 138 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 MAGEA12P43365 314 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 PLOD1Q02809 727 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-211ENST00000556536 UAP1L1Q3KQV9 507 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 KRT71Q3SY84 523 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 CEP85LQ5SZL2 805 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 CAPRIN2Q6IMN6 1127 aaKnown RBP17.02■□□□□ 0.32
TUBB3-211ENST00000556536 IYDQ6PHW0 289 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 LVRNQ6Q4G3 990 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 ABRAXAS1Q6UWZ7 409 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 WASH2PQ6VEQ5 465 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 TIFABQ6ZNK6 161 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 ZDHHC1Q8WTX9 485 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 ANKRD7Q92527 254 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 ISL2Q96A47 359 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 MTBPQ96DY7 904 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 LINGO1Q96FE5 620 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 INSM2Q96T92 566 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-211ENST00000556536 GPAMQ9HCL2 828 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 WASH6PQ9NQA3 447 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 NLGN3Q9NZ94 848 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 SIRPGQ9P1W8 387 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 LGALS13Q9UHV8 139 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 RUVBL2Q9Y230 463 aaKnown RBP17.02■□□□□ 0.32
TUBB3-211ENST00000556536 BTBD3Q9Y2F9 522 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 PCDHGB2Q9Y5G2 931 aa17.02■□□□□ 0.32
TUBB3-211ENST00000556536 ADAMTS9Q9P2N4 1935 aa17.02■□□□□ 0.31
TUBB3-211ENST00000556536 A0A1W2PPM1 405 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms