RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 GP1BBP13224 206 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 PTPN4P29074 926 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 CTNNA1P35221 906 aaKnown RBP12.93□□□□□ -0.34
TGFB3-204ENST00000556285 CD97P48960 835 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 ZNF140P52738 457 aaPredicted RBP12.93□□□□□ -0.34
TGFB3-204ENST00000556285 EIF3EP60228 445 aaKnown RBP12.93□□□□□ -0.34
TGFB3-204ENST00000556285 TUBB4BP68371 445 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 ABRQ12979 859 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 SEMA5AQ13591 1074 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 TUBB2AQ13885 445 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 UGT8Q16880 541 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 CCDC181Q5TID7 509 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 ITPRIPL1Q6GPH6 555 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 TMEM126BQ8IUX1 230 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 APLFQ8IW19 511 aaPredicted RBP12.93□□□□□ -0.34
TGFB3-204ENST00000556285 TEX19Q8NA77 164 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 PHC3Q8NDX5 983 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 MR1Q95460 341 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 LINC00615Q96LM1 132 aaPredicted RBP12.93□□□□□ -0.34
TGFB3-204ENST00000556285 CD180Q99467 661 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 TUBB2BQ9BVA1 445 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 TLR10Q9BXR5 811 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 KLHL25Q9H0H3 589 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 KCND1Q9NSA2 647 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 CRLS1Q9UJA2 301 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
TGFB3-204ENST00000556285 PCDHA3Q9Y5H8 950 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 BTN3A3O00478 584 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 PJA2O43164 708 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 LDB2O43679 373 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 ZBTB11O95625 1053 aaPredicted RBP12.92□□□□□ -0.34
TGFB3-204ENST00000556285 RECKO95980 971 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 RBP3P10745 1247 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 PTMSP20962 102 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 PDHA2P29803 388 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 PRLHRP49683 370 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
TGFB3-204ENST00000556285 ZNF658BQ4V348 819 aaPredicted RBP12.92□□□□□ -0.34
TGFB3-204ENST00000556285 ARMC6Q6NXE6 501 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 DARS2Q6PI48 645 aaKnown RBP12.92□□□□□ -0.34
TGFB3-204ENST00000556285 BPHLQ86WA6 291 aaPredicted RBP12.92□□□□□ -0.34
TGFB3-204ENST00000556285 NXPE1Q8N323 547 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 ZFPM2Q8WW38 1151 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 ALG3Q92685 438 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 DCUN1D1Q96GG9 259 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 TEX15Q9BXT5 2789 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 OSBPL8Q9BZF1 889 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 CHST8Q9H2A9 424 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 SOHLH2Q9NX45 425 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 POMT2Q9UKY4 750 aa12.92□□□□□ -0.34
TGFB3-204ENST00000556285 FARSAQ9Y285 508 aaKnown RBP12.92□□□□□ -0.34
TGFB3-204ENST00000556285 REXO2Q9Y3B8 237 aaKnown RBP12.92□□□□□ -0.34
TGFB3-204ENST00000556285 SNRNP200O75643 2136 aaKnown RBP12.92□□□□□ -0.34
TGFB3-204ENST00000556285 CCDC66A2RUB6 948 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 SOWAHDA6NJG2 315 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 ARGFXA6NJG6 315 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 CPNE3O75131 537 aaKnown RBP12.91□□□□□ -0.34
TGFB3-204ENST00000556285 PYGMP11217 842 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 ATP1B2P14415 290 aaPredicted RBP12.91□□□□□ -0.34
TGFB3-204ENST00000556285 PVRP15151 417 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 ST6GAL1P15907 406 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 TPH1P17752 444 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 MC4RP32245 332 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 COPS2P61201 443 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 KRT33BQ14525 404 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 SPA17Q15506 151 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 ZNF789Q5FWF6 425 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 PLEKHS1Q5SXH7 462 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 CYB5D1Q6P9G0 228 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 ZNF517Q6ZMY9 492 aaPredicted RBP12.91□□□□□ -0.34
TGFB3-204ENST00000556285 SNX20Q7Z614 316 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 CDKL3Q8IVW4 592 aaPredicted RBP12.91□□□□□ -0.34
TGFB3-204ENST00000556285 FAM26EQ8N5C1 309 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 OR1L3Q8NH93 324 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 HM13Q8TCT9 377 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 LCN9Q8WX39 176 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 DNAJC1Q96KC8 554 aaKnown RBP12.91□□□□□ -0.34
TGFB3-204ENST00000556285 SPATA13Q96N96 652 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 FERD3LQ96RJ6 166 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 COPS8Q99627 209 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 TBL1YQ9BQ87 522 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 GPR87Q9BY21 358 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 TRIM5Q9C035 493 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 OR52A5Q9H2C5 316 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 XKR8Q9H6D3 395 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 COG4Q9H9E3 785 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 BTRCQ9Y297 605 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 AAR2Q9Y312 384 aaKnown RBP12.91□□□□□ -0.34
TGFB3-204ENST00000556285 PIKFYVEQ9Y2I7 2098 aa12.91□□□□□ -0.34
TGFB3-204ENST00000556285 GSAPA4D1B5 854 aa12.9□□□□□ -0.34
TGFB3-204ENST00000556285 BTN3A1O00481 513 aa12.9□□□□□ -0.34
TGFB3-204ENST00000556285 CRTAMO95727 393 aa12.9□□□□□ -0.34
TGFB3-204ENST00000556285 CAPN1P07384 714 aa12.9□□□□□ -0.34
TGFB3-204ENST00000556285 ITGALP20701 1170 aa12.9□□□□□ -0.34
TGFB3-204ENST00000556285 CDH3P22223 829 aa12.9□□□□□ -0.34
TGFB3-204ENST00000556285 GNLYP22749 145 aa12.9□□□□□ -0.34
TGFB3-204ENST00000556285 CTNNA2P26232 953 aa12.9□□□□□ -0.34
TGFB3-204ENST00000556285 PRDX3P30048 256 aaKnown RBP12.9□□□□□ -0.34
TGFB3-204ENST00000556285 PTGIRP43119 386 aa12.9□□□□□ -0.34
TGFB3-204ENST00000556285 PREPP48147 710 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms