RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 DOK6Q6PKX4 331 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ENOSF1Q7L5Y1 443 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 GALNT5Q7Z7M9 940 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 BEST3Q8N1M1 668 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 SLC38A5Q8WUX1 472 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 SNRNP27Q8WVK2 155 aaKnown RBP2.86□□□□□ -1.95
SCFD1-218ENST00000556256 LRRC59Q96AG4 307 aaKnown RBP2.86□□□□□ -1.95
SCFD1-218ENST00000556256 RHBDF1Q96CC6 855 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 GRAMD2BQ96HH9 432 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 NUDT16L1Q9BRJ7 211 aaKnown RBP2.86□□□□□ -1.95
SCFD1-218ENST00000556256 TMX4Q9H1E5 349 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-218ENST00000556256 SMARCAD1Q9H4L7 1026 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 SEBOXQ9HB31 216 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ANKEF1Q9NU02 776 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ACSS1Q9NUB1 689 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-218ENST00000556256 ATAD3AQ9NVI7 634 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 SEC63Q9UGP8 760 aaKnown RBP2.86□□□□□ -1.95
SCFD1-218ENST00000556256 KLK13Q9UKR3 277 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 NENFQ9UMX5 172 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 PCDHGB4Q9UN71 923 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 SNX8Q9Y5X2 465 aa2.86□□□□□ -1.95
SCFD1-218ENST00000556256 A0A1W2PPI3 338 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 OR2A25A4D2G3 310 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 M0QZ24 198 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 MAP2K7O14733 419 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 SMAD9O15198 467 aaKnown RBP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 OGG1O15527 345 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 MITFO75030 526 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 TMCC2O75069 709 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 TPPPO94811 219 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 MOCS3O95396 460 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 NR3C1P04150 777 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 ICAM1P05362 532 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 ADRB2P07550 413 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 SELLP14151 372 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 CSF2RAP15509 400 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 ZNF23P17027 643 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 IL11P20809 199 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 APOBEC1P41238 236 aaKnown RBP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 PRCPP42785 496 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 SLC15A1P46059 708 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 CCR10P46092 362 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 NR2C2P49116 596 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 GPR143P51810 404 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 STK4Q13043 487 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 IKQ13123 557 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 BECN1Q14457 450 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 KIR2DS3Q14952 304 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 DECR1Q16698 335 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 PNLIPRP3Q17RR3 467 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 TMEM198Q66K66 360 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 TRIM65Q6PJ69 517 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 ZNF704Q6ZNC4 412 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 SH2D5Q6ZV89 423 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 ATG9AQ7Z3C6 839 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 CCDC89Q8N998 374 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 APBB2Q92870 758 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 CALML4Q96GE6 196 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 NCAPGQ9BPX3 1015 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 MXD3Q9BW11 206 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 C1QTNF1Q9BXJ1 281 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 MAK16Q9BXY0 300 aaKnown RBP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 PIGMQ9H3S5 423 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 PDE7BQ9NP56 450 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 PAG1Q9NWQ8 432 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 MARCH4Q9P2E8 410 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 COPG2Q9UBF2 871 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 OR14J1Q9UGF5 321 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 NRBP1Q9UHY1 535 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 PADI3Q9ULW8 664 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 KCNJ14Q9UNX9 436 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 EXO1Q9UQ84 846 aaKnown RBP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 TMEM5Q9Y2B1 443 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 RABGAP1Q9Y3P9 1069 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 CMAHPQ9Y471 501 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 TTLL3Q9Y4R7 772 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 TMEM184BQ9Y519 407 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-218ENST00000556256 STK36Q9NRP7 1315 aa2.85□□□□□ -1.95
SCFD1-218ENST00000556256 KANSL1LA0AUZ9 987 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 TIMM44O43615 452 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 ERAL1O75616 437 aaKnown RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 BEST1O76090 585 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 HIST1H2ABP04908 130 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 TPOP07202 933 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 PLA2G4BP0C869 781 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 AKR1B1P15121 316 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 ANXA7P20073 488 aaKnown RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 MSH3P20585 1137 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 HIST1H2ADP20671 130 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 GCH1P30793 250 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 PNLIPRP2P54317 469 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 MFAP4P55083 255 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 SNX16P57768 344 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 CSNK2A1P68400 391 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 IFI35P80217 286 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-218ENST00000556256 PPARDQ03181 441 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 CXCL9Q07325 125 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 ZSCAN23Q3MJ62 389 aa2.84□□□□□ -1.95
SCFD1-218ENST00000556256 ZNF343Q6P1L6 599 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms