RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 GSE1Q14687 1217 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 SPA17Q15506 151 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 CFAP206Q8IYR0 622 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 CCDC170Q8IYT3 715 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 LILRA3Q8N6C8 439 aaPredicted RBP18.33■□□□□ 0.52
CDKN3-209ENST00000556102 OR13C4Q8NGS5 318 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 HEXDCQ8WVB3 486 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 C19orf43Q9BQ61 176 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 CCM2Q9BSQ5 444 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 TRIM55Q9BYV6 548 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 FARSAQ9Y285 508 aaKnown RBP18.33■□□□□ 0.52
CDKN3-209ENST00000556102 EFR3BQ9Y2G0 817 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 PIKFYVEQ9Y2I7 2098 aa18.33■□□□□ 0.52
CDKN3-209ENST00000556102 SPENQ96T58 3664 aaKnown RBP18.33■□□□□ 0.52
CDKN3-209ENST00000556102 RP1L1Q8IWN7 2480 aaPredicted RBP18.32■□□□□ 0.52
CDKN3-209ENST00000556102 CFAP99D6REC4 459 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 MATN2O00339 956 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 PJA2O43164 708 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 DNAJB5O75953 348 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 STK10O94804 968 aaKnown RBP18.32■□□□□ 0.52
CDKN3-209ENST00000556102 RBP3P10745 1247 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 POLR2CP19387 275 aaPredicted RBP18.32■□□□□ 0.52
CDKN3-209ENST00000556102 ITGALP20701 1170 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 PTPN7P35236 360 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 ZNF140P52738 457 aaPredicted RBP18.32■□□□□ 0.52
CDKN3-209ENST00000556102 GPS2Q13227 327 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 MSLNQ13421 630 aaPredicted RBP18.32■□□□□ 0.52
CDKN3-209ENST00000556102 LAMB3Q13751 1172 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 FBXO38Q6PIJ6 1188 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 ZNF517Q6ZMY9 492 aaPredicted RBP18.32■□□□□ 0.52
CDKN3-209ENST00000556102 NXPE1Q8N323 547 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 MR1Q95460 341 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 PPM1MQ96MI6 270 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 LRFN5Q96NI6 719 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 PPP1R2P1Q96PQ5 205 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 COPS8Q99627 209 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 POMT2Q9UKY4 750 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 PCDHA3Q9Y5H8 950 aa18.32■□□□□ 0.52
CDKN3-209ENST00000556102 KCNN4O15554 427 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 PDGFAP04085 211 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 CDH3P22223 829 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 CTNNA2P26232 953 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 CYLC1P35663 651 aaPredicted RBP18.31■□□□□ 0.52
CDKN3-209ENST00000556102 HADHAP40939 763 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 MLLT10P55197 1068 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 GSDMDP57764 484 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 EIF3EP60228 445 aaKnown RBP18.31■□□□□ 0.52
CDKN3-209ENST00000556102 IL10RAQ13651 578 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 IZUMO3Q5VZ72 239 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 DARS2Q6PI48 645 aaKnown RBP18.31■□□□□ 0.52
CDKN3-209ENST00000556102 SARM1Q6SZW1 724 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 SNX20Q7Z614 316 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 ATCAYQ86WG3 371 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 ACVR1CQ8NER5 493 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 OR4E2Q8NGC2 313 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 SPATA13Q96N96 652 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 TBL1YQ9BQ87 522 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 TLR10Q9BXR5 811 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 OSBPL8Q9BZF1 889 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 FANCEQ9HB96 536 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 C1GALT1Q9NS00 363 aa18.31■□□□□ 0.52
CDKN3-209ENST00000556102 FEZ2Q9UHY8 353 aaPredicted RBP18.31■□□□□ 0.52
CDKN3-209ENST00000556102 USP9XQ93008 2570 aaPredicted RBP18.3■□□□□ 0.52
CDKN3-209ENST00000556102 C17orf113A0A1B0GUU1 675 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 SLC9B1P1A6NJY1 282 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 KLK3P07288 261 aaPredicted RBP18.3■□□□□ 0.52
CDKN3-209ENST00000556102 ATP1B2P14415 290 aaPredicted RBP18.3■□□□□ 0.52
CDKN3-209ENST00000556102 TMPRSS15P98073 1019 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 CPZQ66K79 652 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 DENND5AQ6IQ26 1287 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 FAM26EQ8N5C1 309 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 SLC38A9Q8NBW4 561 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 CCDC110Q8TBZ0 833 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 LCN9Q8WX39 176 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 CPT1BQ92523 772 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 LRRC45Q96CN5 670 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 CALR3Q96L12 384 aaKnown RBP18.3■□□□□ 0.52
CDKN3-209ENST00000556102 CHST8Q9H2A9 424 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 FAM96AQ9H5X1 160 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 COG4Q9H9E3 785 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 ARNT2Q9HBZ2 717 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 SYTL2Q9HCH5 934 aa18.3■□□□□ 0.52
CDKN3-209ENST00000556102 PCDHGA9Q9Y5G4 932 aaKnown RBP18.3■□□□□ 0.52
CDKN3-209ENST00000556102 USP9YO00507 2555 aaPredicted RBP18.3■□□□□ 0.52
CDKN3-209ENST00000556102 IGLV3-16A0A075B6K0 115 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 ZNF189O75820 626 aaPredicted RBP18.29■□□□□ 0.52
CDKN3-209ENST00000556102 ABRQ12979 859 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 GPR33Q49SQ1 333 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 PLEKHS1Q5SXH7 462 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 KLHDC8BQ8IXV7 354 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 DSELQ8IZU8 1212 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 FERD3LQ96RJ6 166 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 FAM118BQ9BPY3 351 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 SLC25A23Q9BV35 468 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 TRIM5Q9C035 493 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 OR52A5Q9H2C5 316 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 SRMSQ9H3Y6 488 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 ZDHHC3Q9NYG2 299 aa18.29■□□□□ 0.52
CDKN3-209ENST00000556102 SPTAN1Q13813 2472 aaKnown RBP18.28■□□□□ 0.52
CDKN3-209ENST00000556102 CCDC66A2RUB6 948 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms