RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 TRIM31Q9BZY9 425 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 WDR26Q9H7D7 661 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ROPN1Q9HAT0 212 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ZFYVE1Q9HBF4 777 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 IL26Q9NPH9 171 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 MRPL40Q9NQ50 206 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CASS4Q9NQ75 786 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 RAD18Q9NS91 495 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 FAIMQ9NVQ4 179 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TRNAU1APQ9NX07 287 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF180Q9UJW8 692 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CROTQ9UKG9 612 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 KLK13Q9UKR3 277 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DMXL2Q8TDJ6 3036 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 SPENQ96T58 3664 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 C1orf232A0A0U1RR37 186 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 A8MX80 341 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 BOLA2-SMG1P6H3BVE0 249 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 MAGEB3O15480 346 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 KCNN4O15554 427 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 NUAK1O60285 661 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 HNRNPCL1O60812 293 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 SDC3O75056 442 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 RFPL3O75679 317 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DCTN3O75935 186 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ANXA9O76027 345 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 RASGRP1O95267 797 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 LDOC1O95751 146 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CREB1P16220 341 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TAC1P20366 129 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 STIP1P31948 543 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 SLCO1A2P46721 670 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 SERPINB8P50452 374 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ATXN3P54252 364 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DRG2P55039 364 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 GEMP55040 296 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DNAJC3Q13217 504 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DCTN2Q13561 401 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 BCL2A1Q16548 175 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF542PQ5EBM4 170 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 PERM1Q5SV97 790 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF362Q5T0B9 420 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ZFYVE27Q5T4F4 411 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ZDHHC20Q5W0Z9 365 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ITPRIPL1Q6GPH6 555 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 THOC7Q6I9Y2 204 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ZDHHC24Q6UX98 284 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 NANOGNBQ7Z5D8 188 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TMPRSS12Q86WS5 348 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 FAM71DQ8N9W8 422 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 KYQ8NBH2 561 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DDHD1Q8NEL9 900 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CCL4L1Q8NHW4 92 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 BRSK1Q8TDC3 778 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 GFM2Q969S9 779 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DGCR14Q96DF8 476 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DNAJC1Q96KC8 554 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 LINC00615Q96LM1 132 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ERP44Q9BS26 406 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ZSCAN5AQ9BUG6 496 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 PITPNM3Q9BZ71 974 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 TIMMDC1Q9NPL8 285 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CUEDC1Q9NWM3 386 aaPredicted RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 DNAJC28Q9NX36 388 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 NCKIPSDQ9NZQ3 722 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 SPASTQ9UBP0 616 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 KLQ9UEF7 1012 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 FTSJ1Q9UET6 329 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 APOBEC3BQ9UH17 382 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 CD84Q9UIB8 345 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 AAR2Q9Y312 384 aaKnown RBP3.85□□□□□ -1.79
LINC00648-202ENST00000555985 ITPR1Q14643 2758 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 PCNX2A6NKB5 2137 aa3.85□□□□□ -1.79
LINC00648-202ENST00000555985 FAM187AA6NFU0 413 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 ERI2A8K979 691 aaKnown RBP3.84□□□□□ -1.79
LINC00648-202ENST00000555985 H3BM21 787 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 TAF4O00268 1085 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 NEMP1O14524 444 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 LSM1O15116 133 aaKnown RBP3.84□□□□□ -1.79
LINC00648-202ENST00000555985 CASC3O15234 703 aaKnown RBP3.84□□□□□ -1.79
LINC00648-202ENST00000555985 RIPK2O43353 540 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 KRT38O76015 456 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 CBX6O95503 412 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 EML2O95834 649 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 CPA3P15088 417 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 ZNF8P17098 575 aaPredicted RBP3.84□□□□□ -1.79
LINC00648-202ENST00000555985 NFKBIAP25963 317 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 IVDP26440 423 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 STX2P32856 288 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 ADCY8P40145 1251 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 HALP42357 657 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 POLD2P49005 469 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 PLTPP55058 493 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 SIM1P81133 766 aaPredicted RBP3.84□□□□□ -1.79
LINC00648-202ENST00000555985 PDE1BQ01064 536 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 LRP8Q14114 963 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 MPP2Q14168 576 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 KCNJ11Q14654 390 aa3.84□□□□□ -1.79
LINC00648-202ENST00000555985 RTP5Q14D33 572 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms