RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 SNX20Q7Z614 316 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 ATCAYQ86WG3 371 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 TMEM126BQ8IUX1 230 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 CFAP206Q8IYR0 622 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 NXPE1Q8N323 547 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 CLEC18CQ8NCF0 446 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 RNF214Q8ND24 703 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 ACVR1CQ8NER5 493 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 ZNF501Q96CX3 271 aaPredicted RBP11.21□□□□□ -0.61
LRP1-209ENST00000555941 SPATA13Q96N96 652 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 COPS8Q99627 209 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 GORASP1Q9BQQ3 440 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 OSBPL8Q9BZF1 889 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 TRIM5Q9C035 493 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 VPS37BQ9H9H4 285 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 FANCEQ9HB96 536 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 FKBPLQ9UIM3 349 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 CRLS1Q9UJA2 301 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 TLK1Q9UKI8 766 aa11.21□□□□□ -0.61
LRP1-209ENST00000555941 FARSAQ9Y285 508 aaKnown RBP11.21□□□□□ -0.61
LRP1-209ENST00000555941 CFAP20Q9Y6A4 193 aaKnown RBP11.21□□□□□ -0.61
LRP1-209ENST00000555941 BTNL10A8MVZ5 291 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 KCNN4O15554 427 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 SGTAO43765 313 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 IPO7O95373 1038 aaKnown RBP11.2□□□□□ -0.62
LRP1-209ENST00000555941 POLBP06746 335 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 RAB40ALP0C0E4 278 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 ATP1B2P14415 290 aaPredicted RBP11.2□□□□□ -0.62
LRP1-209ENST00000555941 PSMB4P28070 264 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 ZNF140P52738 457 aaPredicted RBP11.2□□□□□ -0.62
LRP1-209ENST00000555941 RWDD2BP57060 319 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 SRSF1Q07955 248 aaKnown RBP eCLIP11.2□□□□□ -0.62
LRP1-209ENST00000555941 RPA4Q13156 261 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 IGFBP7Q16270 282 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 KLHDC8BQ8IXV7 354 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
LRP1-209ENST00000555941 CPT1BQ92523 772 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 RMDN2Q96LZ7 410 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 PANX2Q96RD6 677 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 SRMSQ9H3Y6 488 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 TFB2MQ9H5Q4 396 aaKnown RBP11.2□□□□□ -0.62
LRP1-209ENST00000555941 MVB12BQ9H7P6 319 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 SOHLH2Q9NX45 425 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 ANKMY1Q9P2S6 941 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 POMT2Q9UKY4 750 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 PCDHGA9Q9Y5G4 932 aaKnown RBP11.2□□□□□ -0.62
LRP1-209ENST00000555941 EPN1Q9Y6I3 576 aaPredicted RBP11.2□□□□□ -0.62
LRP1-209ENST00000555941 DOPEY2Q9Y3R5 2298 aa11.2□□□□□ -0.62
LRP1-209ENST00000555941 IGLV3-16A0A075B6K0 115 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 MACROD2A1Z1Q3 448 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 H7C0S8 307 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 MEN1O00255 615 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 IFRD1O00458 451 aaPredicted RBP11.19□□□□□ -0.62
LRP1-209ENST00000555941 CDH3P22223 829 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 KPNA2P52292 529 aaKnown RBP11.19□□□□□ -0.62
LRP1-209ENST00000555941 LAMB3Q13751 1172 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 GPR19Q15760 415 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 PARP6Q2NL67 630 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 DENND5AQ6IQ26 1287 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 DUS1LQ6P1R4 473 aaKnown RBP11.19□□□□□ -0.62
LRP1-209ENST00000555941 FAM199XQ6PEV8 388 aaPredicted RBP11.19□□□□□ -0.62
LRP1-209ENST00000555941 CERS6Q6ZMG9 384 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 TMEM135Q86UB9 458 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 TMTC1Q8IUR5 882 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 TTC13Q8NBP0 860 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 OR4E2Q8NGC2 313 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 LCN9Q8WX39 176 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 MR1Q95460 341 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 MIB2Q96AX9 1013 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 TBL1YQ9BQ87 522 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 DPH2Q9BQC3 489 aaPredicted RBP11.19□□□□□ -0.62
LRP1-209ENST00000555941 APOL2Q9BQE5 337 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 NLNQ9BYT8 704 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 PITPNM3Q9BZ71 974 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 C10orf88Q9H8K7 445 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 AKIRIN1Q9H9L7 192 aaPredicted RBP11.19□□□□□ -0.62
LRP1-209ENST00000555941 MLXIPLQ9NP71 852 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 ZDHHC3Q9NYG2 299 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 SERTAD3Q9UJW9 196 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 PCDHGB7Q9Y5F8 929 aa11.19□□□□□ -0.62
LRP1-209ENST00000555941 TRBV5-4A0A0C4DH59 114 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 GOLGA6L9A6NEM1 432 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 SLC9B1P1A6NJY1 282 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 QSOX1O00391 747 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 PSMD3O43242 534 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 LDB2O43679 373 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 AP2A2O94973 939 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 HBQ1P09105 142 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 POLR2CP19387 275 aaPredicted RBP11.18□□□□□ -0.62
LRP1-209ENST00000555941 ACRV1P26436 265 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 PRDX3P30048 256 aaKnown RBP11.18□□□□□ -0.62
LRP1-209ENST00000555941 PREPP48147 710 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 PGDP52209 483 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 NAP1L1P55209 391 aaKnown RBP11.18□□□□□ -0.62
LRP1-209ENST00000555941 GPS2Q13227 327 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 ZNF658BQ4V348 819 aaPredicted RBP11.18□□□□□ -0.62
LRP1-209ENST00000555941 PLEKHS1Q5SXH7 462 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 PAPD7Q5XG87 772 aaKnown RBP11.18□□□□□ -0.62
LRP1-209ENST00000555941 HPS6Q86YV9 775 aa11.18□□□□□ -0.62
LRP1-209ENST00000555941 DSELQ8IZU8 1212 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms