RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CYP1A2P05177 515 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 EPHA3P29320 983 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ELP6Q0PNE2 266 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 METTL27Q8N6F8 245 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CNDP2Q96KP4 475 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 RAI2Q9Y5P3 530 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ATP6AP2A0A1C7CYW4 349 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 TVP23AA6NH52 213 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 hCG_2039718K7EN88 272 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 AXIN1O15169 862 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ATP6AP2O75787 350 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 IFNW1P05000 195 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 FGF1P05230 155 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CPN2P22792 545 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CLEC12AQ5QGZ9 265 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 PLET1Q6UQ28 207 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF101Q8IZC7 436 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 DCBLD1Q8N8Z6 715 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 VAT1Q99536 393 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CCDC28BQ9BUN5 200 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 MEAF6Q9HAF1 191 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 FZD3Q9NPG1 666 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 REM1O75628 298 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 PVALBP20472 110 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CXCR1P25024 350 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 MSX2P35548 267 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 OR12D2P58182 307 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 SEMG2Q02383 582 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ST3GAL1Q11201 340 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 GRIK2Q13002 908 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ENPP2Q13822 863 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 PLGLAQ15195 96 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 TBC1D21Q8IYX1 336 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 OR4K2Q8NGD2 314 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ATXN2LQ8WWM7 1075 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 DGAT2Q96PD7 388 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 C15orf41Q9Y2V0 281 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 A0A0G2JN53 185 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 FABP3P05413 133 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CD2P06729 351 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ETS2P15036 469 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 PTNP21246 168 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 SPAM1P38567 509 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 NOXRED1Q6NXP6 359 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 DPY19L4Q7Z388 723 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF554Q86TJ5 538 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 CMTR2Q8IYT2 770 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 OR10Q1Q8NGQ4 319 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ANKRD27Q96NW4 1050 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 NIFKQ9BYG3 293 aaKnown RBP6.8□□□□□ -1.32
SYNE2-216ENST00000555002 KCTD5Q9NXV2 234 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 ABCD2Q9UBJ2 740 aa6.8□□□□□ -1.32
SYNE2-216ENST00000555002 A0A1B0GVT2 93 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 A0A1W2PPL8 197 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CNOT4O95628 575 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 OGNP20774 298 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CORO1AP31146 461 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 SLC1A2P43004 574 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 RPIAP49247 311 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ARHGAP40Q5TG30 622 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 USP30Q70CQ3 517 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 OTOP3Q7RTS5 596 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 SLC29A4Q7RTT9 530 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CUZD1Q86UP6 607 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM151BQ8IW70 566 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 LRTM1Q9HBL6 345 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 STOX2Q9P2F5 926 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TESMINQ9Y4I5 508 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 FXYD6-FXYD2A0A087WZ82 144 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 METTL21EPA6NDL7 271 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CAPN14A8MX76 684 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ACKR2O00590 384 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CCNKO75909 580 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 MPSTP25325 297 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 AADACL2Q6P093 401 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF550Q7Z398 422 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TRAPPC6BQ86SZ2 158 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GJD3Q8N144 294 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 JAGN1Q8N5M9 183 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TMEM156Q8N614 296 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 FXYD6Q9H0Q3 95 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 AGO3Q9H9G7 860 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 SERINC1Q9NRX5 453 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 R3HDM2Q9Y2K5 976 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 hCG_1807616A0A1W2PRN6 198 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 NARSO43776 548 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 IFNA21P01568 189 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ZNF3P17036 446 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 ATP4AP20648 1035 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 GADD45AP24522 165 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 TGFB2P61812 414 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 DGKZQ13574 1117 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 OR2T12Q8NG77 320 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 EBNA1BP2Q99848 306 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 PLA2G12BQ9BX93 195 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 CCNB1IP1Q9NPC3 277 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 WASF2Q9Y6W5 498 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 POLR2JP52435 117 aaKnown RBP6.79□□□□□ -1.32
SYNE2-216ENST00000555002 PLA2G16P53816 162 aa6.79□□□□□ -1.32
SYNE2-216ENST00000555002 NRLP54845 237 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms