RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SPINT2O43291 252 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PLRG1O43660 514 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 KCNJ13O60928 360 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 NDUFS7O75251 213 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GAGE7O76087 117 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CENPBP07199 599 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PRSS2P07478 247 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GAGE12FP0CL80 117 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GAGE12GP0CL81 117 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GAGE12IP0CL82 117 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SAT1P21673 171 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 RRM1P23921 792 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PON1P27169 355 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ACADLP28330 430 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 BDKRB2P30411 391 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 NF2P35240 595 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 EIF2DP41214 584 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SLC15A1P46059 708 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 HNRNPH2P55795 449 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 MRPS5P82675 430 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 NUCB1Q02818 461 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 LTBQ06643 244 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 FOXM1Q08050 763 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 AIMP1Q12904 312 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GAGE1Q13065 139 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GAGE4Q13068 117 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PLCB4Q15147 1175 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CTF1Q16619 201 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 MTHFSDQ2M296 383 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF805Q5CZA5 627 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PAPPA-AS1Q5QFB9 102 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 DCST1Q5T197 706 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 MFSD4BQ5TF39 518 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 FAM69BQ5VUD6 431 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SUSD4Q5VX71 490 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 WDR73Q6P4I2 378 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF790Q6PG37 636 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 KCTD18Q6PI47 426 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 GALNT5Q7Z7M9 940 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SDCCAG8Q86SQ7 713 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TSPAN33Q86UF1 283 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SPATA2LQ8IUW3 424 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ADHFE1Q8IWW8 467 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TDHQ8IZJ6 230 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 FBXL14Q8N1E6 418 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TMTC2Q8N394 836 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CLIP4Q8N3C7 705 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 POC5Q8NA72 575 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 CLEC18CQ8NCF0 446 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 LMO3Q8TAP4 145 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 RAET1EQ8TD07 263 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TRPC4APQ8TEL6 797 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 WFIKKN2Q8TEU8 576 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 U2AF1L4Q8WU68 220 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 FAM216AQ8WUB2 273 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 NUDCD2Q8WVJ2 157 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 APBB2Q92870 758 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ORAI1Q96D31 301 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ERO1AQ96HE7 468 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 EGLN2Q96KS0 407 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 NUDCD1Q96RS6 583 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM204Q9BSN7 226 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TEX12Q9BXU0 123 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 HRH4Q9H3N8 390 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PIGMQ9H3S5 423 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SEBOXQ9HB31 216 aaPredicted RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PLSCR4Q9NRQ2 329 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ANKEF1Q9NU02 776 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 NKIRAS2Q9NYR9 191 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SEC63Q9UGP8 760 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 TINAGQ9UJW2 476 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 RALYQ9UKM9 306 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 ACSL5Q9ULC5 683 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 EXO1Q9UQ84 846 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 SNX9Q9Y5X1 595 aa1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PRRC2BQ5JSZ5 2229 aaKnown RBP1.51□□□□□ -2.17
PRPF39-208ENST00000554785 PSME4Q14997 1843 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ECM29Q5VYK3 1845 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 KIF26BQ2KJY2 2108 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ANKRD36CQ5JPF3 1778 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 LRRC37AA6NMS7 1700 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 CHD9Q3L8U1 2897 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 DLG5Q8TDM6 1919 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PLXNA1Q9UIW2 1896 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 EPG5Q9HCE0 2579 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 A0A087WYN8 130 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 OR2A25A4D2G3 310 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 GOLGA6L9A6NEM1 432 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 LRRC72A6NJI9 287 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 EIF4E1BA6NMX2 242 aaKnown RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 SOCS6O14544 535 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 TIMM44O43615 452 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 MITFO75030 526 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ENTPD3O75355 529 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 UFL1O94874 794 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PAPSS2O95340 614 aaPredicted RBP1.5□□□□□ -2.17
PRPF39-208ENST00000554785 PGM3O95394 542 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 ICAM1P05362 532 aa1.5□□□□□ -2.17
PRPF39-208ENST00000554785 TUBBP07437 444 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms