RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 TMEM88BA6NKF7 163 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CD3EAPO15446 510 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 WBP4O75554 376 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 AP1G2O75843 785 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PGLSO95336 258 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SOD1P00441 154 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 GOT2P00505 430 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CYBBP04839 570 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 HMBSP08397 361 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PORP16435 677 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TPP2P29144 1249 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PMLP29590 882 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SHMT2P34897 504 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PCGF2P35227 344 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 GRIA3P42263 894 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CCR10P46092 362 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 AP1S1P61966 158 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SNRPGP62308 76 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CLCQ05315 142 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CACNG1Q06432 222 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SFSWAPQ12872 951 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 NFATC2Q13469 925 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 AQP6Q13520 282 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CUL3Q13618 768 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 GRB7Q14451 532 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 EIF4HQ15056 248 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 RFX4Q33E94 735 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ALFQ53S48 1182 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PRSS36Q5K4E3 855 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 KIAA1841Q6NSI8 718 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 NANOGP8Q6NSW7 305 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DCDC5Q6ZRR9 648 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 NRSN1Q8IZ57 195 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DCBLD1Q8N8Z6 715 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DCAF4L2Q8NA75 395 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DDHD1Q8NEL9 900 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 FRS2Q8WU20 508 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CMTM7Q96FZ5 175 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PPP1R16AQ96I34 528 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TXNDC15Q96J42 360 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MRGPRX3Q96LB0 322 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ZNF512Q96ME7 567 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CATSPER2Q96P56 530 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CGREF1Q99674 301 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 HTATIP2Q9BUP3 242 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ADI1Q9BV57 179 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TRIM15Q9C019 465 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CAB39LQ9H9S4 337 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SYTL2Q9HCH5 934 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TM9SF3Q9HD45 589 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TAS2R7Q9NYW3 318 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PKD2L1Q9P0L9 805 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DNAJB9Q9UBS3 223 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 RUVBL2Q9Y230 463 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TNPO3Q9Y5L0 923 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MDC1Q14676 2089 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 A0A1B0GTW7 788 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CLCA1A8K7I4 914 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SYCE1LA8MT33 242 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MEI4A8MW99 385 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 G3V3G9 751 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 H0YHG0 523 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PRICKLE3O43900 615 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CLDN11O75508 207 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ATE1O95260 518 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 LBPP18428 481 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CD247P20963 164 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TACR2P21452 398 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 RPS4Y1P22090 263 aaKnown RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 YY1P25490 414 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SSTR3P32745 418 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 HNMTP50135 292 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 NUP107P57740 925 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 KCNJ10P78508 379 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 NFATC3Q12968 1075 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 RAB33AQ14088 237 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DAG1Q14118 895 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 SELPLGQ14242 412 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 DMC1Q14565 340 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 RAB39AQ14964 217 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TBCEQ15813 527 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 NFE2Q16621 373 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 HSP90AA5PQ58FG0 334 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 THEMIS2Q5TEJ8 643 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 NAIF1Q69YI7 327 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 FAM131BQ86XD5 332 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 MIER2Q8N344 545 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PCYOX1LQ8NBM8 494 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 ICA1LQ8NDH6 482 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 RAB2BQ8WUD1 216 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PYDC1Q8WXC3 89 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 KIAA1143Q96AT1 154 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 BIRC7Q96CA5 298 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 COX14Q96I36 57 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 TOX2Q96NM4 488 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 UBL7Q96S82 380 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 KLF6Q99612 283 aaPredicted RBP3.38□□□□□ -1.87
SEC23A-207ENST00000554615 PAAF1Q9BRP4 392 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 APOL6Q9BWW8 343 aa3.38□□□□□ -1.87
SEC23A-207ENST00000554615 CD244Q9BZW8 370 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms