RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 PRKAB1Q9Y478 270 aa10.26□□□□□ -0.77
TMEM55B-205ENST00000554028 NPEPPSL1A6NEC2 478 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 SUPT3HB4E1H0 165 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 CDC7O00311 574 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 TRIM13O60858 407 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 LILRB5O75023 590 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 SUPT3HO75486 399 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 TSPAN12O95859 305 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 CATP04040 527 aaKnown RBP10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 RPN2P04844 631 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 ENO2P09104 434 aaPredicted RBP10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 SLC35G4P0C7Q5 338 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 DHRS4L1P0CG22 281 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 ACP5P13686 325 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 CTSEP14091 401 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 BCKDHBP21953 392 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 IDSP22304 550 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 GRK2P25098 689 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 AVPR2P30518 371 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 DHPSP49366 369 aaPredicted RBP10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 C21orf59P57076 290 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 NAA20P61599 178 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 ABRQ12979 859 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 SP140Q13342 867 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 GBX1Q14549 363 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 PDK4Q16654 411 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 ZNF528Q3MIS6 628 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 CFAP157Q5JU67 520 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 LYSMD4Q5XG99 296 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 CYHR1Q6ZMK1 362 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 UBE2R2Q712K3 238 aaPredicted RBP10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 PIWIL4Q7Z3Z4 852 aaKnown RBP10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 HID1Q8IV36 788 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 ZNF547Q8IVP9 402 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 SLC22A15Q8IZD6 547 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 CFAP61Q8NHU2 1237 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 DNASE2BQ8WZ79 361 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 EXT2Q93063 718 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 SLC6A18Q96N87 628 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 EGFL8Q99944 293 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 OSGEPL1Q9H4B0 414 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 MANSC1Q9H8J5 431 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 PARVBQ9HBI1 364 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 KLC4Q9NSK0 619 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 OXSMQ9NWU1 459 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 TRNAU1APQ9NX07 287 aaKnown RBP10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 CD274Q9NZQ7 290 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 SUSD2Q9UGT4 822 aa10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 SPTBN5Q9NRC6 3674 aaKnown RBP10.25□□□□□ -0.77
TMEM55B-205ENST00000554028 PLXNA2O75051 1894 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 ZNF106Q9H2Y7 1883 aaKnown RBP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 SPTY2D1-AS1A0A0U1RR47 76 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 TK2O00142 265 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 TLR4O00206 839 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 BCAT2O15382 392 aaPredicted RBP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 IPO13O94829 963 aaKnown RBP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 VIMP08670 466 aaKnown RBP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 ANXA5P08758 320 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 TDGF1P13385 188 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 MAOBP27338 520 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 ALDH3A1P30838 453 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 HALP42357 657 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 DPP6P42658 865 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 PREPP48147 710 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 AFF3P51826 1226 aaKnown RBP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 DNAJB13P59910 316 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 CBX1P83916 185 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 DMPKQ09013 629 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 ILF3Q12906 894 aaKnown RBP eCLIP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 STX3Q13277 289 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 NFE2L1Q14494 772 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 KRT33BQ14525 404 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 CHI3L2Q15782 390 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 CDKL4Q5MAI5 379 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 LIPMQ5VYY2 423 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 METRNLQ641Q3 311 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 TTC19Q6DKK2 380 aaPredicted RBP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 ARMCX6Q7L4S7 300 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 C11orf96Q7Z7L8 435 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 PARGQ86W56 976 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 C10orf107Q8IVU9 208 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 TCAIMQ8N3R3 496 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 FBXO39Q8N4B4 442 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 PPP4R1Q8TF05 950 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 ATL1Q8WXF7 558 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 ASB11Q8WXH4 323 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 OR1E3Q8WZA6 343 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 ZNF75CPQ92670 426 aaPredicted RBP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 TSACCQ96A04 125 aaPredicted RBP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 PTERQ96BW5 349 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 SLC12A9Q9BXP2 914 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 CCDC134Q9H6E4 229 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 RDH14Q9HBH5 336 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 FGF22Q9HCT0 170 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 TM9SF3Q9HD45 589 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 MRPL40Q9NQ50 206 aaKnown RBP10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 ZSCAN32Q9NX65 697 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 NUDT4Q9NZJ9 180 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 NCKIPSDQ9NZQ3 722 aa10.24□□□□□ -0.77
TMEM55B-205ENST00000554028 OARD1Q9Y530 152 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms