RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 TLN1Q9Y490 2541 aaKnown RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 QSOX1O00391 747 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 APOA4P06727 396 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 F7P08709 466 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 PRSS56P0CW18 603 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 CDK4P11802 303 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 CHN1P15882 459 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 FDXRP22570 491 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 FMO4P31512 558 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 ACSL1P33121 698 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 MDH1P40925 334 aaKnown RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 SKIV2L2P42285 1042 aaKnown RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 NSG1P42857 185 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 CDKN1CP49918 316 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 TAS2R38P59533 333 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 RPS21P63220 83 aaKnown RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 PDAP1Q13442 181 aaKnown RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 AGERQ15109 404 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 TSNAXIP1Q2TAA8 658 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 RBM20Q5T481 1227 aaKnown RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 KYAT3Q6YP21 454 aaKnown RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 RFLNAQ6ZTI6 216 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 OR14C36Q8NHC7 312 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 GDAP1Q8TB36 358 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 TCP10LQ8TDR4 215 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 BTN2A2Q8WVV5 523 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 KCNJ9Q92806 393 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 SCAMP4Q969E2 229 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 CENPTQ96BT3 561 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 ZNF578Q96N58 590 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 TSSK1BQ9BXA7 367 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 ZCCHC2Q9C0B9 1178 aaKnown RBP14.24□□□□□ -0.13
SHMT2-208ENST00000553868 P2RY12Q9H244 342 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 SYTL2Q9HCH5 934 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 MID2Q9UJV3 735 aa14.24□□□□□ -0.13
SHMT2-208ENST00000553868 ARID1BQ8NFD5 2236 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-208ENST00000553868 ZNF106Q9H2Y7 1883 aaKnown RBP14.23□□□□□ -0.13
SHMT2-208ENST00000553868 IGLV3-16A0A075B6K0 115 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 E5RI56 91 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 K7ENP7 123 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 PHGDHO43175 533 aaKnown RBP14.23□□□□□ -0.13
SHMT2-208ENST00000553868 SUV39H1O43463 412 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 IGLV3-19P01714 112 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 AKT1P31749 480 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 RPA3P35244 121 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-208ENST00000553868 GPR1P46091 355 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 ADPRHP54922 357 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 SGCGQ13326 291 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 CCDC153Q494R4 210 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 GPRC6AQ5T6X5 926 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 KLC3Q6P597 504 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 ZNF549Q6P9A3 640 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 INO80CQ6PI98 192 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-208ENST00000553868 MACC1Q6ZN28 852 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 MICALCLQ6ZW33 695 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 PHYKPLQ8IUZ5 450 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 DDHD1Q8NEL9 900 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 GLYATL1Q969I3 302 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 BIRC7Q96CA5 298 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 PANX3Q96QZ0 392 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 CAPS2Q9BXY5 557 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 GPAMQ9HCL2 828 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 SERGEFQ9UGK8 458 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 TRMT6Q9UJA5 497 aaKnown RBP14.23□□□□□ -0.13
SHMT2-208ENST00000553868 ADAM21Q9UKJ8 722 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 PLLPQ9Y342 182 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 PLXNA2O75051 1894 aa14.23□□□□□ -0.13
SHMT2-208ENST00000553868 SCN8AQ9UQD0 1980 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 IGLON5A6NGN9 336 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 LRRC72A6NJI9 287 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 ENO4A6NNW6 628 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 OR1I1O60431 355 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 AP2A2O94973 939 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 FSBPO95073 299 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 OR56A5P0C7T3 313 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 SLC35E2BP0CK96 405 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 GM2AP17900 193 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 CHRM3P20309 590 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 MSH3P20585 1137 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 TEAD1P28347 426 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 GYS2P54840 703 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 CDKN2DP55273 166 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 GABREP78334 506 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 FAM83EQ2M2I3 478 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 AGAP9Q5VTM2 703 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 RAET1GQ6H3X3 334 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 TAX1BP1Q86VP1 789 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 HORMAD1Q86X24 394 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 ACVR1CQ8NER5 493 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 MGARPQ8TDB4 240 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 SAP25Q8TEE9 199 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 DENND1AQ8TEH3 1009 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 ASB12Q8WXK4 309 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 BIRC8Q96P09 236 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 ELF4Q99607 663 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-208ENST00000553868 OLFM1Q99784 485 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 ORAI3Q9BRQ5 295 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 BTBD1Q9H0C5 482 aa14.22□□□□□ -0.13
SHMT2-208ENST00000553868 SGK2Q9HBY8 427 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms