RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 TCP10LQ8TDR4 215 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 GLMNQ92990 594 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 SCARF2Q96GP6 870 aaPredicted RBP9.57□□□□□ -0.88
CHD8-204ENST00000553622 LINC00615Q96LM1 132 aaPredicted RBP9.57□□□□□ -0.88
CHD8-204ENST00000553622 FOPNLQ96NB1 174 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 FAM111AQ96PZ2 611 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 GSDMCQ9BYG8 508 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 DERL2Q9GZP9 239 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 WWP1Q9H0M0 922 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 ALG9Q9H6U8 611 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 FSCN3Q9NQT6 498 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 GPR27Q9NS67 375 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 TMEM216Q9P0N5 145 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 CPSF2Q9P2I0 782 aaKnown RBP9.57□□□□□ -0.88
CHD8-204ENST00000553622 KLHL42Q9P2K6 505 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 SLC17A7Q9P2U7 560 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 KLF15Q9UIH9 416 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 GRID1Q9ULK0 1009 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 RNF112Q9ULX5 631 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 DOLKQ9UPQ8 538 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 SMG5Q9UPR3 1016 aaKnown RBP9.57□□□□□ -0.88
CHD8-204ENST00000553622 SNX11Q9Y5W9 270 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 DGKBQ9Y6T7 804 aa9.57□□□□□ -0.88
CHD8-204ENST00000553622 C17orf113A0A1B0GUU1 675 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SLC5A10A0PJK1 596 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 KLHL33A6NCF5 533 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SUPT3HB4E1H0 165 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 IFRD1O00458 451 aaPredicted RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 SDC3O75056 442 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SUPT3HO75486 399 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SLCO2B1O94956 709 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 ZWINTO95229 277 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 WISP3O95389 354 aaPredicted RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 S100BP04271 92 aaPredicted RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 CELA2BP08218 269 aaPredicted RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 NEFHP12036 1026 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 CD1DP15813 335 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 DPP6P42658 865 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 CSRP3P50461 194 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 ATP6V0D1P61421 351 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 IL9RQ01113 521 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 PLOD1Q02809 727 aaPredicted RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 LRP8Q14114 963 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 KRT33BQ14525 404 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 TSNQ15631 228 aaKnown RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 HHATQ5VTY9 493 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 METRNLQ641Q3 311 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SH2D5Q6ZV89 423 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 RABEPKQ7Z6M1 372 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 CLEC14AQ86T13 490 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SLC22A15Q8IZD6 547 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 ARMC2Q8NEN0 867 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 FAM76AQ8TAV0 307 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 MDM1Q8TC05 714 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 LMX1AQ8TE12 382 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 PTERQ96BW5 349 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 UBXN10Q96LJ8 280 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 ARRDC1-AS1Q9H2J1 176 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SMOC1Q9H4F8 434 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SSU72Q9NP77 194 aaKnown RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 PRDM8Q9NQV8 689 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 TRNAU1APQ9NX07 287 aaKnown RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 UTP6Q9NYH9 597 aaKnown RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 XPR1Q9UBH6 696 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SPASTQ9UBP0 616 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 IKZF3Q9UKT9 509 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 ACSL5Q9ULC5 683 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 CFAP20Q9Y6A4 193 aaKnown RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 CUL9Q8IWT3 2517 aa9.56□□□□□ -0.88
CHD8-204ENST00000553622 SNRNP200O75643 2136 aaKnown RBP9.56□□□□□ -0.88
CHD8-204ENST00000553622 PCDH15Q96QU1 1955 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 MUC3AQ02505 3323 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 TRBV23OR9-2A0A075B6M9 112 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 WDR91A4D1P6 747 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 NCF1BA6NI72 391 aaPredicted RBP9.55□□□□□ -0.88
CHD8-204ENST00000553622 NCF1CA8MVU1 366 aaPredicted RBP9.55□□□□□ -0.88
CHD8-204ENST00000553622 PATE3B3GLJ2 98 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 TK2O00142 265 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 EIF3FO00303 357 aaPredicted RBP9.55□□□□□ -0.88
CHD8-204ENST00000553622 POLR3GO15318 223 aaPredicted RBP9.55□□□□□ -0.88
CHD8-204ENST00000553622 PRPF4O43172 522 aaKnown RBP eCLIP9.55□□□□□ -0.88
CHD8-204ENST00000553622 TYROBPO43914 113 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 KCNJ13O60928 360 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 GPC4O75487 556 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 TSPAN12O95859 305 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 CSF2P04141 144 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 RBP1P09455 135 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 MPC1LP0DKB6 136 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 NCF1P14598 390 aaPredicted RBP9.55□□□□□ -0.88
CHD8-204ENST00000553622 NME1P15531 152 aaKnown RBP9.55□□□□□ -0.88
CHD8-204ENST00000553622 MAP4P27816 1152 aaKnown RBP9.55□□□□□ -0.88
CHD8-204ENST00000553622 MPLP40238 635 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 SLC26A3P40879 764 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 HALP42357 657 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 BDKRB1P46663 353 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 HNRNPKP61978 463 aaKnown RBP eCLIP9.55□□□□□ -0.88
CHD8-204ENST00000553622 DMPKQ09013 629 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 GRIK2Q13002 908 aa9.55□□□□□ -0.88
CHD8-204ENST00000553622 RPA4Q13156 261 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms