RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CLDN14O95500 239 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 ST6GAL1P15907 406 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 SERPINB6P35237 376 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 ZNF165P49910 485 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 NIPAL4Q0D2K0 466 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 MAMLD1Q13495 774 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 NFE2L1Q14494 772 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 SLC9A5Q14940 896 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 CDSNQ15517 529 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 CAMK4Q16566 473 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 HSP90AA4PQ58FG1 418 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 PLEKHA7Q6IQ23 1121 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 MRPL14Q6P1L8 145 aaKnown RBP13.37□□□□□ -0.27
PRPF39-204ENST00000553605 ISLR2Q6UXK2 745 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 TMC3Q7Z5M5 1100 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 LRRC49Q8IUZ0 686 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 OR4E2Q8NGC2 313 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 GDAP1Q8TB36 358 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 CPLX3Q8WVH0 158 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 CSPG4P5Q96PW8 444 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 VPS35Q96QK1 796 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 LMF1Q96S06 567 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 INSM2Q96T92 566 aaPredicted RBP13.37□□□□□ -0.27
PRPF39-204ENST00000553605 AP1M1Q9BXS5 423 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 ADGRE3Q9BY15 652 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 KIR3DX1Q9H7L2 352 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 NLRC4Q9NPP4 1024 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 HAUS2Q9NVX0 235 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 SEC14L3Q9UDX4 400 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 TMPRSS11EQ9UL52 423 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 SHOC2Q9UQ13 582 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 AP1M2Q9Y6Q5 423 aa13.37□□□□□ -0.27
PRPF39-204ENST00000553605 PCM1Q15154 2024 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 MATN2O00339 956 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 FANCGO15287 622 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 SLC4A1P02730 911 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 ESRRAP11474 423 aaPredicted RBP13.36□□□□□ -0.27
PRPF39-204ENST00000553605 HLA-DPA1P20036 260 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 MMP11P24347 488 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 PRDX3P30048 256 aaKnown RBP13.36□□□□□ -0.27
PRPF39-204ENST00000553605 CASP6P55212 293 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 RBPJQ06330 500 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 MFAP5Q13361 173 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 DPYSL2Q16555 572 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 ZFYVE27Q5T4F4 411 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 ACAD10Q6JQN1 1059 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 RHBDD2Q6NTF9 364 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 CDHR3Q6ZTQ4 885 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 PROKR1Q8TCW9 393 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 BRSK1Q8TDC3 778 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 MAML1Q92585 1016 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 C12orf66Q96MD2 445 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 ENKD1Q9H0I2 346 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 SEMA3GQ9NS98 782 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 PARVAQ9NVD7 372 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 AMACRQ9UHK6 382 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 PCDHGB6Q9Y5F9 930 aa13.36□□□□□ -0.27
PRPF39-204ENST00000553605 GSAPA4D1B5 854 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 MATN3O15232 486 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 OR2B3O76000 313 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 KLHL18O94889 574 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 ATP1A3P13637 1013 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 CSNK1G2P78368 415 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 ARG2P78540 354 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 INAQ16352 499 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 NKAIN1Q4KMZ8 207 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 ATP13A5Q4VNC0 1218 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 METRNLQ641Q3 311 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 FAAH2Q6GMR7 532 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 TGIF2LYQ8IUE0 185 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 NANOS1Q8WY41 292 aaKnown RBP13.35□□□□□ -0.27
PRPF39-204ENST00000553605 N4BP2L2Q92802 583 aaPredicted RBP13.35□□□□□ -0.27
PRPF39-204ENST00000553605 THOC3Q96J01 351 aaKnown RBP13.35□□□□□ -0.27
PRPF39-204ENST00000553605 AGPAT1Q99943 283 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 NDC1Q9BTX1 674 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 PITPNM3Q9BZ71 974 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 KLHL25Q9H0H3 589 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 WWP1Q9H0M0 922 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 GSX1Q9H4S2 264 aaPredicted RBP13.35□□□□□ -0.27
PRPF39-204ENST00000553605 DHCR7Q9UBM7 475 aaKnown RBP13.35□□□□□ -0.27
PRPF39-204ENST00000553605 CDC23Q9UJX2 597 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 DNMT3AQ9Y6K1 912 aaPredicted RBP13.35□□□□□ -0.27
PRPF39-204ENST00000553605 COLEC10Q9Y6Z7 277 aa13.35□□□□□ -0.27
PRPF39-204ENST00000553605 TMEM191CA6NGB0 347 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 TMEM200CA6NKL6 621 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 SOCS6O14544 535 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 HLA-DQB2P05538 268 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 PIRTP0C851 137 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 PVRP15151 417 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 MST1P26927 711 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 CD86P42081 329 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 KLK7P49862 253 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 CTSCP53634 463 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 KRT33BQ14525 404 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 TIGD7Q6NT04 549 aaPredicted RBP13.34□□□□□ -0.27
PRPF39-204ENST00000553605 TMEM220Q6QAJ8 160 aa13.34□□□□□ -0.27
PRPF39-204ENST00000553605 MEX3BQ6ZN04 569 aaKnown RBP13.34□□□□□ -0.27
PRPF39-204ENST00000553605 BEND7Q8N7W2 519 aaPredicted RBP13.34□□□□□ -0.27
PRPF39-204ENST00000553605 RASGEF1AQ8N9B8 481 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms