RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ZNF514Q96K75 400 aaPredicted RBP17.75■□□□□ 0.43
SHMT2-206ENST00000553529 FERD3LQ96RJ6 166 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 CCM2Q9BSQ5 444 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 ASPSCR1Q9BZE9 553 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 B3GNT4Q9C0J1 378 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 KIR3DX1Q9H7L2 352 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 CHRAC1Q9NRG0 131 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 PLAGL1Q9UM63 463 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 TMEM184BQ9Y519 407 aaPredicted RBP17.75■□□□□ 0.43
SHMT2-206ENST00000553529 PIKFYVEQ9Y2I7 2098 aa17.75■□□□□ 0.43
SHMT2-206ENST00000553529 E7EVH7 732 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 KCNJ13O60928 360 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 FURINP09958 794 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 NELFEP18615 380 aaKnown RBP17.74■□□□□ 0.43
SHMT2-206ENST00000553529 PSMA3P25788 255 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 OAS2P29728 719 aaKnown RBP17.74■□□□□ 0.43
SHMT2-206ENST00000553529 VPS41P49754 854 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 PDE1BQ01064 536 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 C19orf57Q0VDD7 668 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 COLEC12Q5KU26 742 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 DNTTIP2Q5QJE6 756 aaKnown RBP17.74■□□□□ 0.43
SHMT2-206ENST00000553529 FAM69BQ5VUD6 431 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 TRIM73Q86UV7 250 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 RASGRP3Q8IV61 690 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 VRK3Q8IV63 474 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 KRT222Q8N1A0 295 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 PRELID2Q8N945 189 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 CCDC89Q8N998 374 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 OR5AR1Q8NGP9 310 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 PPP1R2P1Q96PQ5 205 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 EPHA6Q9UF33 1036 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 TCAF1Q9Y4C2 921 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 BSNQ9UPA5 3926 aa17.74■□□□□ 0.43
SHMT2-206ENST00000553529 KRT87PA6NCN2 255 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 TK2O00142 265 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 BTN3A1O00481 513 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 SPAG6O75602 509 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 NTRK1P04629 796 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 RALBP11234 206 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 NMBRP28336 390 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 STIP1P31948 543 aaKnown RBP17.73■□□□□ 0.43
SHMT2-206ENST00000553529 FDFT1P37268 417 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 BASP1P80723 227 aaKnown RBP17.73■□□□□ 0.43
SHMT2-206ENST00000553529 TUBB3Q13509 450 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 CCNG2Q16589 344 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 GPR33Q49SQ1 333 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 ANKRD22Q5VYY1 191 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 PWWP2BQ6NUJ5 590 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 FAM199XQ6PEV8 388 aaPredicted RBP17.73■□□□□ 0.43
SHMT2-206ENST00000553529 FAM20CQ8IXL6 584 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 RBM12BQ8IXT5 1001 aaKnown RBP17.73■□□□□ 0.43
SHMT2-206ENST00000553529 OR52E1Q8NGJ3 308 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 ZDHHC12Q96GR4 267 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 SLC41A2Q96JW4 573 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 ALS2CR12Q96Q35 445 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 KCNF1Q9H3M0 494 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 GPN2Q9H9Y4 310 aaPredicted RBP17.73■□□□□ 0.43
SHMT2-206ENST00000553529 LNPEPQ9UIQ6 1025 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 CROTQ9UKG9 612 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 ACSL5Q9ULC5 683 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 KALRNO60229 2985 aa17.73■□□□□ 0.43
SHMT2-206ENST00000553529 BHMG1C9JSJ3 638 aaPredicted RBP17.72■□□□□ 0.43
SHMT2-206ENST00000553529 CFAP99D6REC4 459 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 GOLGA8KD6RF30 607 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 GOLGA8TH3BQL2 631 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 PSMD3O43242 534 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 HCRTR1O43613 425 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 CTSBP07858 339 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 PLA2G2AP14555 144 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 MGAT1P26572 445 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 STAT5AP42229 794 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 NFATC3Q12968 1075 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 BOP1Q14137 746 aaKnown RBP17.72■□□□□ 0.43
SHMT2-206ENST00000553529 LCN10Q6JVE6 187 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 C16orf46Q6P387 395 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 ZNF662Q6ZS27 426 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 LINC00523Q86TU6 105 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 MPP5Q8N3R9 675 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 ELMO1Q92556 727 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 TEFMQ96QE5 360 aaKnown RBP17.72■□□□□ 0.43
SHMT2-206ENST00000553529 AP1M1Q9BXS5 423 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 RAB33BQ9H082 229 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 SYBUQ9NX95 663 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 IL1RAPL1Q9NZN1 696 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 SEMA5BQ9P283 1151 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 PAK5Q9P286 719 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 ICKQ9UPZ9 632 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 RPS6KL1Q9Y6S9 549 aa17.72■□□□□ 0.43
SHMT2-206ENST00000553529 GSAPA4D1B5 854 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 SLC9B1P1A6NJY1 282 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 TERTO14746 1132 aaKnown RBP17.71■□□□□ 0.43
SHMT2-206ENST00000553529 AVILO75366 819 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 ATXN8OSP0DMR3 200 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 FGF5P12034 268 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 ARNTP27540 789 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 RPS18P62269 152 aaKnown RBP17.71■□□□□ 0.43
SHMT2-206ENST00000553529 ACVR1Q04771 509 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 KRT33BQ14525 404 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 OOSP2Q86WS3 158 aa17.71■□□□□ 0.43
SHMT2-206ENST00000553529 SIDT2Q8NBJ9 832 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms