RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CTSCP53634 463 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 RPS15P62841 145 aaKnown RBP11.56□□□□□ -0.56
CKAP4-202ENST00000552828 IL10RAQ13651 578 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 LDLRAP1Q5SW96 308 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 IZUMO3Q5VZ72 239 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 ITPRIPL1Q6GPH6 555 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 FAM199XQ6PEV8 388 aaPredicted RBP11.56□□□□□ -0.56
CKAP4-202ENST00000552828 KDELC1Q6UW63 502 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 CERS6Q6ZMG9 384 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 SLC35F6Q8N357 371 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 GDAP1Q8TB36 358 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 SLC35B2Q8TB61 432 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 CPT1CQ8TCG5 803 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 MAIP1Q8WWC4 291 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 ZNF501Q96CX3 271 aaPredicted RBP11.56□□□□□ -0.56
CKAP4-202ENST00000552828 TTC25Q96NG3 672 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 LRFN5Q96NI6 719 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 FCRL5Q96RD9 977 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 LATS2Q9NRM7 1088 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 SMOXQ9NWM0 555 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 FAM153AQ9UHL3 310 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 RSPH14Q9UHP6 348 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 PYCARDQ9ULZ3 195 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 VPS4AQ9UN37 437 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 FARSAQ9Y285 508 aaKnown RBP11.56□□□□□ -0.56
CKAP4-202ENST00000552828 R3HDM2Q9Y2K5 976 aaKnown RBP11.56□□□□□ -0.56
CKAP4-202ENST00000552828 MAP4K5Q9Y4K4 846 aa11.56□□□□□ -0.56
CKAP4-202ENST00000552828 KLHL33A6NCF5 533 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 USP27XA6NNY8 438 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 GAPDHSO14556 408 aaPredicted RBP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 UGT1A9O60656 530 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 CPNE3O75131 537 aaKnown RBP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 ZBTB11O95625 1053 aaPredicted RBP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 FGGP02679 453 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 MTHFD1P11586 935 aaKnown RBP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 UGT1A6P19224 532 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 NFKB1P19838 968 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 UGT1A1P22309 533 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 UGT1A4P22310 534 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 GNLYP22749 145 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 CXCR5P32302 372 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 CA5AP35218 305 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 SPAM1P38567 509 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 TNNT3P45378 269 aaPredicted RBP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 WNT3AP56704 352 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 RPS18P62269 152 aaKnown RBP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 PDE1BQ01064 536 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 NFE2L1Q14494 772 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 CHRNA6Q15825 494 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 SIRPB2Q5JXA9 342 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 DNTTIP2Q5QJE6 756 aaKnown RBP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 GPRC6AQ5T6X5 926 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 FHL5Q5TD97 284 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 CPZQ66K79 652 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 TMEM220Q6QAJ8 160 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 BEND7Q8N7W2 519 aaPredicted RBP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 SLC38A9Q8NBW4 561 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 ADAMTS17Q8TE56 1095 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 PBKQ96KB5 322 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 SPATA13Q96N96 652 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 SLC25A23Q9BV35 468 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 ING2Q9H160 280 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 UGT1A7Q9HAW7 530 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 UGT1A10Q9HAW8 530 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 UGT1A8Q9HAW9 530 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 KCND1Q9NSA2 647 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 HRASLS2Q9NWW9 162 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 UBP1Q9NZI7 540 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 HACD3Q9P035 362 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 ACSL5Q9ULC5 683 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 PSMD13Q9UNM6 376 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 BTRCQ9Y297 605 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 PCDHGB7Q9Y5F8 929 aa11.55□□□□□ -0.56
CKAP4-202ENST00000552828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 ZNF106Q9H2Y7 1883 aaKnown RBP11.55□□□□□ -0.56
CKAP4-202ENST00000552828 GLYATL1P3A0A0U1RQE8 302 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 UBA6A0AVT1 1052 aaPredicted RBP11.54□□□□□ -0.56
CKAP4-202ENST00000552828 C5orf60A6NFR6 353 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 GPR39O43194 453 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 LIASO43766 372 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 SCRG1O75711 98 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 ANXA9O76027 345 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 RAB40ALP0C0E4 278 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 STIP1P31948 543 aaKnown RBP11.54□□□□□ -0.56
CKAP4-202ENST00000552828 ARL4DP49703 201 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 GPS2Q13227 327 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 MPP3Q13368 585 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 ITGA9Q13797 1035 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 PRPSAP1Q14558 356 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 PLCL1Q15111 1095 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 LONRF2Q1L5Z9 754 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 NADK2Q4G0N4 442 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 ANKRD20A2Q5SQ80 823 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 ANKRD20A1Q5TYW2 823 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 ANKRD20A3Q5VUR7 823 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 FAM151BQ6UXP7 276 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 HPS6Q86YV9 775 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 FAM71DQ8N9W8 422 aa11.54□□□□□ -0.56
CKAP4-202ENST00000552828 CCDC110Q8TBZ0 833 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms