RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 B4E171 279 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 NPIPB8E9PQR5 432 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 RNF103O00237 685 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CLIC1O00299 241 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CYB561D2O14569 222 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TSPAN4O14817 238 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CASC3O15234 703 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CLDN3O15551 220 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ATG13O75143 517 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TULP3O75386 442 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TACC1O75410 805 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 JTBO76095 146 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 RHOBTB1O94844 696 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF202O95125 648 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 KAT7O95251 611 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TBX18O95935 607 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 MBPP02686 304 aaPredicted RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 IGHV4-34P06331 123 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ENO1P06733 434 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 PLA2G4BP0C869 781 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CSH1P0DML2 217 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CSH2P0DML3 217 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 PEPDP12955 493 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ACP5P13686 325 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ITGB6P18564 788 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 DRD4P21917 467 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 WARSP23381 471 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ACAT1P24752 427 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ITPKBP27987 946 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 GSTM2P28161 218 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 PCSK6P29122 969 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 EIF2S3P41091 472 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TSPAN7P41732 249 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 PAFAH1B1P43034 410 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 GPD2P43304 727 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 VPS41P49754 854 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 AGTR2P50052 363 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 RPS6KA3P51812 740 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ARPP19P56211 112 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 FOXL2P58012 376 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 SIM1P81133 766 aaPredicted RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 HOXA4Q00056 320 aaPredicted RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CREB5Q02930 508 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CDK18Q07002 472 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 FOXI1Q12951 378 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ALKBH1Q13686 389 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 THOC5Q13769 683 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TRIP6Q15654 476 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 BAK1Q16611 211 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TSTD2Q5T7W7 516 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 HECTD2Q5U5R9 776 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 SFMBT2Q5VUG0 894 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ACAD10Q6JQN1 1059 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 FAM180BQ6P0A1 224 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 C19orf48Q6RUI8 117 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 KYAT3Q6YP21 454 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 TRIM72Q6ZMU5 477 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 PCGF5Q86SE9 256 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 VRK3Q8IV63 474 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 BRSK2Q8IWQ3 736 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ZBTB8OSQ8IWT0 167 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 BBS7Q8IWZ6 715 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 LAS2Q8IYD9 372 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ULK2Q8IYT8 1036 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 HACE1Q8IYU2 909 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CRYBG2Q8N1P7 616 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 MINDY1Q8N5J2 469 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ENDOVQ8N8Q3 282 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CADM4Q8NFZ8 388 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ADAMTS18Q8TE60 1221 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CLEC4CQ8WTT0 213 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 UCMAQ8WVF2 138 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 SECISBP2LQ93073 1101 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ZUFSPQ96AP4 578 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 PCED1BQ96HM7 432 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 APOPT1Q96IL0 206 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF845Q96IR2 970 aaPredicted RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 FYTTD1Q96QD9 318 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 KCNK16Q96T55 309 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CD180Q99467 661 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 MRPL45Q9BRJ2 306 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ADPGKQ9BRR6 497 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CBWD1Q9BRT8 395 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 PI4K2AQ9BTU6 479 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ZNF747Q9BV97 191 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 KRTAP4-7Q9BYR0 210 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 CLPBQ9H078 707 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 NUAK2Q9H093 628 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 DPEP3Q9H4B8 488 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 NMUR1Q9HB89 426 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 OLFML3Q9NRN5 406 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 OLA1Q9NTK5 396 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ARL8BQ9NVJ2 186 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 THAP1Q9NVV9 213 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 DUS2Q9NX74 493 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 ALKBH4Q9NXW9 302 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 GAR1Q9NY12 217 aaKnown RBP2.42□□□□□ -2.02
CPSF6-207ENST00000551516 DPP3Q9NY33 737 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 FOXJ2Q9P0K8 574 aa2.42□□□□□ -2.02
CPSF6-207ENST00000551516 SLC17A6Q9P2U8 582 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms