RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 CLEC4MQ9H2X3 399 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-203ENST00000551316 GOLPH3LQ9H4A5 285 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 ZNF160Q9HCG1 818 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 SIX2Q9NPC8 291 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 L3MBTL1Q9Y468 752 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 HRH3Q9Y5N1 445 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 FHOD1Q9Y613 1164 aa12.97□□□□□ -0.33
SNRPF-203ENST00000551316 A0A1W2PQ67 120 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 KMOO15229 486 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 FGF10O15520 208 aaPredicted RBP12.96□□□□□ -0.33
SNRPF-203ENST00000551316 WDPCPO95876 746 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 MSL3P1P0C860 447 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 IDSP22304 550 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 GABRA4P48169 554 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 ST13P50502 369 aaKnown RBP12.96□□□□□ -0.33
SNRPF-203ENST00000551316 ARSEP51690 589 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 DLX5P56178 289 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 TPI1P60174 286 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 LRRC63Q05C16 580 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 CACNG1Q06432 222 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 PNOCQ13519 176 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 RFTN1Q14699 578 aaPredicted RBP12.96□□□□□ -0.33
SNRPF-203ENST00000551316 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 NKAIN1Q4KMZ8 207 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 NAA35Q5VZE5 725 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 KRBA2Q6ZNG9 492 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 ENOSF1Q7L5Y1 443 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 CDC20BQ86Y33 519 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 DTWD1Q8N5C7 304 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.96□□□□□ -0.33
SNRPF-203ENST00000551316 HES7Q9BYE0 225 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 DEF6Q9H4E7 631 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 IMP3Q9NV31 184 aaKnown RBP12.96□□□□□ -0.33
SNRPF-203ENST00000551316 TMEM51Q9NW97 253 aa12.96□□□□□ -0.33
SNRPF-203ENST00000551316 H7C1Q1 480 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 KCNAB3O43448 404 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 PRLP01236 227 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 STX17P56962 302 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 DCDP81605 110 aaKnown RBP12.95□□□□□ -0.34
SNRPF-203ENST00000551316 ZIC1Q15915 447 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 KLHL35Q6PF15 583 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 CEP128Q6ZU80 1094 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 VWA5B2Q8N398 1253 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 GPR26Q8NDV2 337 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 C8orf44Q96CB5 159 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNRPF-203ENST00000551316 FAM83DQ9H4H8 585 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 SOX17Q9H6I2 414 aaPredicted RBP12.95□□□□□ -0.34
SNRPF-203ENST00000551316 TRIM39Q9HCM9 518 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 CTSFQ9UBX1 484 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 APEX2Q9UBZ4 518 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 SLC24A2Q9UI40 661 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 NOCTQ9UK39 431 aaKnown RBP12.95□□□□□ -0.34
SNRPF-203ENST00000551316 RNF6Q9Y252 685 aa12.95□□□□□ -0.34
SNRPF-203ENST00000551316 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 FAM237BA0A1B0GVD1 139 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 DYTNA2CJ06 578 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 NPIPA5E9PKD4 350 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 E9PLN8 166 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 SLC25A14O95258 325 aaPredicted RBP12.94□□□□□ -0.34
SNRPF-203ENST00000551316 MTHFD1P11586 935 aaKnown RBP12.94□□□□□ -0.34
SNRPF-203ENST00000551316 SYKP43405 635 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 EPHB1P54762 984 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 NFE2L1Q14494 772 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 COBLL1Q53SF7 1204 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 ZNF569Q5MCW4 686 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 HIBCHQ6NVY1 386 aaPredicted RBP12.94□□□□□ -0.34
SNRPF-203ENST00000551316 SCYL2Q6P3W7 929 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 NOP9Q86U38 636 aaKnown RBP12.94□□□□□ -0.34
SNRPF-203ENST00000551316 TRIM73Q86UV7 250 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 CCDC71Q8IV32 467 aaPredicted RBP12.94□□□□□ -0.34
SNRPF-203ENST00000551316 SIAH3Q8IW03 269 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNRPF-203ENST00000551316 ACRBPQ8NEB7 543 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 THAP3Q8WTV1 239 aaPredicted RBP12.94□□□□□ -0.34
SNRPF-203ENST00000551316 CPLX3Q8WVH0 158 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 HAS2Q92819 552 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 CEP63Q96MT8 703 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 INSM2Q96T92 566 aaPredicted RBP12.94□□□□□ -0.34
SNRPF-203ENST00000551316 VKORC1Q9BQB6 163 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 TRIM51Q9BSJ1 452 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 PITPNM3Q9BZ71 974 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 NPIPA1Q9UND3 350 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 CHKBQ9Y259 395 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 ASB1Q9Y576 335 aa12.94□□□□□ -0.34
SNRPF-203ENST00000551316 C1orf232A0A0U1RR37 186 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 BTN3A3O00478 584 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 SMAD7O15105 426 aaKnown RBP12.93□□□□□ -0.34
SNRPF-203ENST00000551316 PRAMEF1O95521 474 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 MMEP08473 750 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 CYP11B1P15538 503 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 RENBPP51606 427 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 OLIG2Q13516 323 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 NKG7Q16617 165 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 TTI2Q6NXR4 508 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 CARFQ8N187 725 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 ZNF655Q8N720 491 aaPredicted RBP12.93□□□□□ -0.34
SNRPF-203ENST00000551316 NAT14Q8WUY8 206 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 GLYATL1Q969I3 302 aa12.93□□□□□ -0.34
SNRPF-203ENST00000551316 HDAC10Q969S8 669 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms