RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CD86P42081 329 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 NUMBP49757 651 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 COPAP53621 1224 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 WNT3AP56704 352 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 MAXP61244 160 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 RPS14P62263 151 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 SARNPP82979 210 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 SATB1Q01826 763 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 DSC2Q02487 901 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 CAV1Q03135 178 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 CDK18Q07002 472 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 C2orf54Q08AI8 447 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 GPS1Q13098 491 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 SPIDRQ14159 915 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TRIM25Q14258 630 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 MORF4L2Q15014 288 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TPSAB1Q15661 275 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 CST6Q15828 149 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TTC31Q49AM3 519 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 CFAP58Q5T655 872 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 DUPD1Q68J44 220 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 KCTD11Q693B1 232 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 NAPEPLDQ6IQ20 393 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 C8orf74Q6P047 294 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 KDELC1Q6UW63 502 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 RANBP10Q6VN20 620 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 B4GALNT4Q76KP1 1039 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 KBTBD6Q86V97 674 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 HOOK3Q86VS8 718 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 RAVER1Q8IY67 606 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 GSPT2Q8IYD1 628 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 NDUFAF2Q8N183 169 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 STK40Q8N2I9 435 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 EIF1ADQ8N9N8 165 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TSTD1Q8NFU3 115 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 RUBCNQ92622 972 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 PRCCQ92733 491 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 ARL8AQ96BM9 186 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 SNF8Q96H20 258 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 OXNAD1Q96HP4 312 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 MRGPRX1Q96LB2 322 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 MCCC1Q96RQ3 725 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TRIB3Q96RU7 358 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TTC1Q99614 292 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 C19orf43Q9BQ61 176 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 CARD6Q9BX69 1037 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 C1QTNF1Q9BXJ1 281 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 FSD1LQ9BXM9 530 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TDRD1Q9BXT4 1180 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 FAM126AQ9BYI3 521 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 PABPC3Q9H361 631 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 ZDHHC6Q9H6R6 413 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 IFT22Q9H7X7 185 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 XAB2Q9HCS7 855 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 DYRK4Q9NR20 520 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 PRMT8Q9NR22 394 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 ASIC3Q9UHC3 531 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 EVLQ9UI08 416 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 PRSS50Q9UI38 385 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 FBXO4Q9UKT5 387 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 SHOC2Q9UQ13 582 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 UTP11Q9Y3A2 253 aaKnown RBP5.74□□□□□ -1.49
SCAF11-213ENST00000550629 PPIL1Q9Y3C6 166 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 TTLL3Q9Y4R7 772 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 RAI2Q9Y5P3 530 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 ACTL7AQ9Y615 435 aa5.74□□□□□ -1.49
SCAF11-213ENST00000550629 VCANP13611 3396 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 MYO10Q9HD67 2058 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 TCF20Q9UGU0 1960 aaKnown RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 A0A1W2PR48 441 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 TCRBV21S2A2A0A5A6 115 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 C16orf96A6NNT2 1141 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 EFCAB8A8MWE9 144 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 KPNA3O00505 521 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 RAD51CO43502 376 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 PI15O43692 258 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 NRP2O60462 931 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 PMPCBO75439 489 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 SEC31AO94979 1220 aaKnown RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 SLU7O95391 586 aaKnown RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 NDST3O95803 873 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 PDGFBP01127 241 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 IL1BP01584 269 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 DNTTP04053 509 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 FGF1P05230 155 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 UGT2B4P06133 528 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 DCNP07585 359 aaKnown RBP5.73□□□□□ -1.49
SCAF11-213ENST00000550629 CTSLP07711 333 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 APRTP07741 180 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ZSCAN5DPP0CG00 497 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 ACADMP11310 421 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 MLNP12872 115 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 GABRG2P18507 467 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 IVDP26440 423 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 PSMB4P28070 264 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 P2RY2P41231 377 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 WASP42768 502 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 NEK3P51956 506 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 MGAT5Q09328 741 aa5.73□□□□□ -1.49
SCAF11-213ENST00000550629 TRAF2Q12933 501 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms