RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 Q75L30 129 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.76□□□□□ -1.65
LIMA1-205ENST00000550592 XRN1Q8IZH2 1706 aaKnown RBP4.76□□□□□ -1.65
LIMA1-205ENST00000550592 RNF113BQ8IZP6 322 aaKnown RBP4.76□□□□□ -1.65
LIMA1-205ENST00000550592 C1orf87Q8N0U7 546 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 RBMXL3Q8N7X1 1067 aaKnown RBP4.76□□□□□ -1.65
LIMA1-205ENST00000550592 TBC1D16Q8TBP0 767 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 SLC44A1Q8WWI5 657 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 ARSGQ96EG1 525 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 SMC6Q96SB8 1091 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 ZNF224Q9NZL3 707 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 WDR35Q9P2L0 1181 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 ZHX1Q9UKY1 873 aaPredicted RBP4.76□□□□□ -1.65
LIMA1-205ENST00000550592 AMDHD2Q9Y303 409 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 PCDHAC2Q9Y5I4 1007 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 ARHGEF10O15013 1369 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 RGPD3A6NKT7 1758 aaPredicted RBP4.76□□□□□ -1.65
LIMA1-205ENST00000550592 RGPD4Q7Z3J3 1758 aa4.76□□□□□ -1.65
LIMA1-205ENST00000550592 NALCNQ8IZF0 1738 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 MYO5BQ9ULV0 1848 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 TRBC2A0A5B9 178 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 OVOL3O00110 214 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 ZBTB43O43298 467 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 PRAMEF11O60813 436 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 CAMTA2O94983 1202 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 PMS2P2O95744 297 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 ACAA1P09110 424 aaPredicted RBP4.75□□□□□ -1.65
LIMA1-205ENST00000550592 VPREB1P12018 145 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 FCGR1AP12314 374 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 GJA1P17302 382 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 LTBQ06643 244 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 MELKQ14680 651 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 PSMD6Q15008 389 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 SNAPC1Q16533 368 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 C1orf141Q5JVX7 400 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 KRT80Q6KB66 452 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 MAP7D3Q8IWC1 876 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 TC2NQ8N9U0 490 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 RBM15BQ8NDT2 890 aaKnown RBP4.75□□□□□ -1.65
LIMA1-205ENST00000550592 ZMAT2Q96NC0 199 aaKnown RBP4.75□□□□□ -1.65
LIMA1-205ENST00000550592 ZNF385AQ96PM9 386 aaKnown RBP4.75□□□□□ -1.65
LIMA1-205ENST00000550592 GPR88Q9GZN0 384 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 GAREM1Q9H706 876 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 ERVMER34-1Q9H9K5 563 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 OLAHQ9NV23 265 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 HAO2Q9NYQ3 351 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 OSGIN1Q9UJX0 560 aa4.75□□□□□ -1.65
LIMA1-205ENST00000550592 TNS3Q68CZ2 1445 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 DUOX2Q9NRD8 1548 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 OR2M5A3KFT3 312 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 ZNF587BE7ETH6 402 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 MYOD1P15172 320 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 CPT2P23786 658 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 TMPOP42166 694 aaKnown RBP4.74□□□□□ -1.65
LIMA1-205ENST00000550592 LBX1P52954 281 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 SPECC1Q5M775 1068 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 TEX38Q6PEX7 206 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 CAMKMTQ7Z624 323 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 SATL1Q86VE3 508 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 ADHFE1Q8IWW8 467 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 SMRP1Q8NCR6 262 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 CFAP61Q8NHU2 1237 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 WDR20Q8TBZ3 569 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 SLC20A1Q8WUM9 679 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 ZNF653Q96CK0 615 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 ERLEC1Q96DZ1 483 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 TMEM19Q96HH6 336 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 CFAP57Q96MR6 1250 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 ZNF830Q96NB3 372 aaPredicted RBP4.74□□□□□ -1.65
LIMA1-205ENST00000550592 TMEM204Q9BSN7 226 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 IL17BQ9UHF5 180 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 DDX25Q9UHL0 483 aaKnown RBP4.74□□□□□ -1.65
LIMA1-205ENST00000550592 PCNTO95613 3336 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 NRAPQ86VF7 1730 aa4.74□□□□□ -1.65
LIMA1-205ENST00000550592 ARHGEF28Q8N1W1 1705 aaKnown RBP4.74□□□□□ -1.65
LIMA1-205ENST00000550592 LMTK2Q8IWU2 1503 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 TULP4Q9NRJ4 1543 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 TO15178 435 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 SLC16A5O15375 505 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 GGPS1O95749 300 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 AFPP02771 609 aaKnown RBP4.73□□□□□ -1.65
LIMA1-205ENST00000550592 ALPLP05186 524 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 CDKN2AP42771 156 aaKnown RBP4.73□□□□□ -1.65
LIMA1-205ENST00000550592 MATR3P43243 847 aaKnown RBP eCLIP4.73□□□□□ -1.65
LIMA1-205ENST00000550592 POLGP54098 1239 aaPredicted RBP4.73□□□□□ -1.65
LIMA1-205ENST00000550592 CDH13P55290 713 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 SNRPEP62304 92 aaKnown RBP4.73□□□□□ -1.65
LIMA1-205ENST00000550592 COG7P83436 770 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 RUNX1T1Q06455 604 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 SLC20A2Q08357 652 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 KIF5AQ12840 1032 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 ARMC3Q5W041 872 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 TMEM211Q6ICI0 200 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 GFRALQ6UXV0 394 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 ZNF704Q6ZNC4 412 aaPredicted RBP4.73□□□□□ -1.65
LIMA1-205ENST00000550592 RBPMS2Q6ZRY4 209 aaKnown RBP4.73□□□□□ -1.65
LIMA1-205ENST00000550592 FBXO39Q8N4B4 442 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 NKAIN3Q8N8D7 197 aa4.73□□□□□ -1.65
LIMA1-205ENST00000550592 SLC38A5Q8WUX1 472 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms