RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 NLGN4XQ8N0W4 816 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 TXLNBQ8N3L3 684 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 TAB3Q8N5C8 712 aaPredicted RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 NLGN4YQ8NFZ3 816 aaPredicted RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 OR4K2Q8NGD2 314 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 GPR150Q8NGU9 434 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 C9orf43Q8TAL5 461 aaPredicted RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 C1orf54Q8WWF1 131 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 KIAA1143Q96AT1 154 aaPredicted RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 SLC45A3Q96JT2 553 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 DNAJC1Q96KC8 554 aaKnown RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 SRPK1Q96SB4 655 aaKnown RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 SLC38A3Q99624 504 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 TIMM29Q9BSF4 260 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 C12orf49Q9H741 205 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 GPN2Q9H9Y4 310 aaPredicted RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 GRPEL1Q9HAV7 217 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 SRA1Q9HD15 236 aaKnown RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 SARS2Q9NP81 518 aaKnown RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 ZNF71Q9NQZ8 489 aaPredicted RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 KLC4Q9NSK0 619 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.74□□□□□ -1.33
CBX5-204ENST00000550411 PLA2G2EQ9NZK7 142 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 OGFRQ9NZT2 677 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 ZNF624Q9P2J8 865 aaPredicted RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 FOXD3Q9UJU5 478 aaPredicted RBP6.74□□□□□ -1.33
CBX5-204ENST00000550411 PILRAQ9UKJ1 303 aa6.74□□□□□ -1.33
CBX5-204ENST00000550411 EML6Q6ZMW3 1958 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 SCN3AQ9NY46 2000 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 IGLV3-16A0A075B6K0 115 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 TRBV5-4A0A0C4DH59 114 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 GOLGA6L9A6NEM1 432 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 LILRA5A6NI73 299 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 OR52A4PA6NMU1 304 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 GOLGA6L6A8MZA4 724 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 GPR89AB7ZAQ6 455 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 STX7O15400 261 aaKnown RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 NKX2-8O15522 239 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 SNX2O60749 519 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 STK10O94804 968 aaKnown RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 SUN1O94901 812 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 ZSCAN5DPP0CG00 497 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 GPR89BP0CG08 455 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 PRKAR1AP10644 381 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 GP1BBP13224 206 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 TPH1P17752 444 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 LPOP22079 712 aaPredicted RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 MAP4P27816 1152 aaKnown RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 OAS2P29728 719 aaKnown RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 CETN2P41208 172 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 SLC19A1P41440 591 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 CDKN1CP49918 316 aaPredicted RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 RELBQ01201 579 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 MC2RQ01718 297 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 DMPKQ09013 629 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 ABHD18Q0P651 414 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 CDC20Q12834 499 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 NFATC2Q13469 925 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 SEMA5AQ13591 1074 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 SNX1Q13596 522 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 RPS6KA1Q15418 735 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 IGFBP7Q16270 282 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 INSCQ1MX18 579 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 PARP6Q2NL67 630 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 SNAP47Q5SQN1 464 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 SEL1L2Q5TEA6 688 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 AGAP9Q5VTM2 703 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 CCDC70Q6NSX1 233 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 ARHGAP22Q7Z5H3 698 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 LRRTM4Q86VH4 590 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 TRAPPC5Q8IUR0 188 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 REXO1L1PQ8IX06 675 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 PIANPQ8IYJ0 282 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 LILRA3Q8N6C8 439 aaPredicted RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 BEND7Q8N7W2 519 aaPredicted RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 BMPERQ8N8U9 685 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 OR10G6Q8NH81 332 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 BRSK1Q8TDC3 778 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 ABHD17AQ96GS6 310 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 CTRCQ99895 268 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 ZPBPQ9BS86 351 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 TBC1D10AQ9BXI6 508 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 SPRY4Q9C004 299 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 TRIT1Q9H3H1 467 aaKnown RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 STN1Q9H668 368 aaKnown RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 ZFAND3Q9H8U3 227 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 LRRC40Q9H9A6 602 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 FBXO8Q9NRD0 319 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 SMARCAL1Q9NZC9 954 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 PDP2Q9P2J9 529 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 CPNE7Q9UBL6 633 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 DMGDHQ9UI17 866 aaKnown RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 DNAJC16Q9Y2G8 782 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 WDR37Q9Y2I8 494 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 AAR2Q9Y312 384 aaKnown RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 SLC30A1Q9Y6M5 507 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 MED13LQ71F56 2210 aa6.73□□□□□ -1.33
CBX5-204ENST00000550411 MN1Q10571 1320 aaPredicted RBP6.73□□□□□ -1.33
CBX5-204ENST00000550411 CROCCQ5TZA2 2017 aa6.72□□□□□ -1.33
CBX5-204ENST00000550411 KIR2DS5A0A0G2JLQ3 304 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms