RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 MPP3Q13368 585 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 TRA2AQ13595 282 aaKnown RBP eCLIP6.54□□□□□ -1.36
TMEM116-208ENST00000549537 SLC1A5Q15758 541 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 AMZ1Q400G9 498 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 ATP13A5Q4VNC0 1218 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 PHF19Q5T6S3 580 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 INO80CQ6PI98 192 aaPredicted RBP6.54□□□□□ -1.36
TMEM116-208ENST00000549537 RANBP10Q6VN20 620 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 PID1Q7Z2X4 250 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 ZNF761Q86XN6 746 aaPredicted RBP6.54□□□□□ -1.36
TMEM116-208ENST00000549537 DTX1Q86Y01 620 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 PHYKPLQ8IUZ5 450 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 BMPERQ8N8U9 685 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 RCBTB1Q8NDN9 531 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 IPMKQ8NFU5 416 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 OR4D9Q8NGE8 314 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 CCDC74BQ96LY2 380 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 CMKLR1Q99788 373 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 TIMM29Q9BSF4 260 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 GPR63Q9BZJ6 419 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 GBA3Q9H227 469 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 BPIFA1Q9NP55 256 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 IL26Q9NPH9 171 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 LUC7LQ9NQ29 371 aaKnown RBP6.54□□□□□ -1.36
TMEM116-208ENST00000549537 PRDM8Q9NQV8 689 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 FOXJ2Q9P0K8 574 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 KLHL8Q9P2G9 620 aaPredicted RBP6.54□□□□□ -1.36
TMEM116-208ENST00000549537 CPNE7Q9UBL6 633 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 TRIM10Q9UDY6 481 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 PISDQ9UG56 409 aa6.54□□□□□ -1.36
TMEM116-208ENST00000549537 RELNP78509 3460 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 SPENQ96T58 3664 aaKnown RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 SDK2Q58EX2 2172 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 KIR2DS5A0A0G2JLQ3 304 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 A0A0G2JNG1 304 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 OR5K4A6NMS3 321 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 H7C0C1 242 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 KIR2DS3K7RE56 304 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 KMOO15229 486 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 DDX3YO15523 660 aaKnown RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 GPR39O43194 453 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ZW10O43264 779 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 VEGFDO43915 354 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 SMNDC1O75940 238 aaKnown RBP eCLIP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 AGTP01019 485 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 RBP3P10745 1247 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 LIPCP11150 499 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 PYGMP11217 842 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 CCL4P13236 92 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 BRAFP15056 766 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ZNF7P17097 686 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 XRCC1P18887 633 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 CDC25BP30305 580 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ATP5OP48047 213 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 RWDD2BP57060 319 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 SRSF6Q13247 344 aaKnown RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 KLF1Q13351 362 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 OLIG2Q13516 323 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 PTPRCAPQ14761 206 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 KIR2DS5Q14953 304 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 TGIF1Q15583 401 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 CHRNA6Q15825 494 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 TM4SF20Q53R12 229 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ANKRD20A2Q5SQ80 823 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ARHGAP40Q5TG30 622 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ANKRD20A1Q5TYW2 823 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 AGAP9Q5VTM2 703 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ANKRD20A3Q5VUR7 823 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 BROXQ5VW32 411 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ZDHHC20Q5W0Z9 365 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 DENND5AQ6IQ26 1287 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 CCDC70Q6NSX1 233 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 TMEM71Q6P5X7 295 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 WDR74Q6RFH5 385 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 CRTC3Q6UUV7 619 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ABRAXAS1Q6UWZ7 409 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 WASH2PQ6VEQ5 465 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ARHGAP22Q7Z5H3 698 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 LRRTM4Q86VH4 590 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 SLC25A41Q8N5S1 370 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 LSM14AQ8ND56 463 aaKnown RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 DDHD1Q8NEL9 900 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 THAP3Q8WTV1 239 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 USP7Q93009 1102 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 BAG1Q99933 345 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 DPYSL5Q9BPU6 564 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 FAM118BQ9BPY3 351 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 DESI2Q9BSY9 194 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ASPSCR1Q9BZE9 553 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 RASSF4Q9H2L5 321 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 UCK1Q9HA47 277 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 WASH6PQ9NQA3 447 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 KLC4Q9NSK0 619 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 SMOXQ9NWM0 555 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 KCNK4Q9NYG8 393 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 OGFRQ9NZT2 677 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 HACD3Q9P035 362 aa6.53□□□□□ -1.36
TMEM116-208ENST00000549537 ZNF624Q9P2J8 865 aaPredicted RBP6.53□□□□□ -1.36
TMEM116-208ENST00000549537 RSPH14Q9UHP6 348 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms