RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 Q6ZVU0 165 aa9.8□□□□□ -0.84
RAB5B-206ENST00000549505 GRASPQ7Z6J2 395 aaPredicted RBP9.8□□□□□ -0.84
RAB5B-206ENST00000549505 BTN2A2Q8WVV5 523 aa9.8□□□□□ -0.84
RAB5B-206ENST00000549505 PPP3R2Q96LZ3 170 aa9.8□□□□□ -0.84
RAB5B-206ENST00000549505 KLHL32Q96NJ5 620 aa9.8□□□□□ -0.84
RAB5B-206ENST00000549505 SIRT5Q9NXA8 310 aa9.8□□□□□ -0.84
RAB5B-206ENST00000549505 TSC22D4Q9Y3Q8 395 aa9.8□□□□□ -0.84
RAB5B-206ENST00000549505 C2orf16Q68DN1 1984 aa9.8□□□□□ -0.84
RAB5B-206ENST00000549505 SLC5A10A0PJK1 596 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 AQP12BA6NM10 295 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 MRASO14807 208 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 NFATC1O95644 943 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 XRCC1P18887 633 aaPredicted RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 UGT1A6P19224 532 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 CAPN3P20807 821 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 UGT1A1P22309 533 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 UGT1A4P22310 534 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 PRDX3P30048 256 aaKnown RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 UGT1A3P35503 534 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 UGT1A5P35504 534 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 DGKGP49619 791 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 EEFSECP57772 596 aaKnown RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 AP1ARQ63HQ0 302 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 LCN8Q6JVE9 175 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 XKR5Q6UX68 686 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 HSD11B1LQ7Z5J1 315 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 AQP12AQ8IXF9 295 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 KBTBD2Q8IY47 623 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 SFRP1Q8N474 314 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 CATSPER1Q8NEC5 780 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 ADCY4Q8NFM4 1077 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 OR6K2Q8NGY2 324 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 POP5Q969H6 163 aaKnown RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 NPAS2Q99743 824 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 ECSITQ9BQ95 431 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 HDAC8Q9BY41 377 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 FAM83DQ9H4H8 585 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 SLC32A1Q9H598 525 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 ZDHHC6Q9H6R6 413 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 PCDH12Q9NPG4 1184 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 SEMA4BQ9NPR2 832 aaPredicted RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 GID8Q9NWU2 228 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 DUS2Q9NX74 493 aaKnown RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 C15orf38-AP3S2A0A0A6YYH1 394 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 E7ENX8 843 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 GPR39O43194 453 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 LILRB5O75023 590 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 KATNA1O75449 491 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 LEFTY1O75610 366 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 FTH1P02794 183 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 PRNPP04156 253 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 HGFP14210 728 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 HOXB9P17482 250 aaPredicted RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 PHKG1Q16816 387 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 C9orf64Q5T6V5 341 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 PAOXQ6QHF9 649 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 ARPINQ7Z6K5 226 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 PQLC1Q8N2U9 271 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 RYBPQ8N488 228 aaPredicted RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 TMEM102Q8N9M5 508 aaPredicted RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 GLB1L3Q8NCI6 653 aaPredicted RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 PPFIBP2Q8ND30 876 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 OR4F6Q8NGB9 312 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 ITFG1Q8TB96 612 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 GATA6Q92908 595 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 SMARCD2Q92925 531 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 WDR34Q96EX3 536 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 KCNA7Q96RP8 456 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 ACTL8Q9H568 366 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 FBRSL1Q9HCM7 1045 aaKnown RBP9.79□□□□□ -0.84
RAB5B-206ENST00000549505 PDE10AQ9Y233 779 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 AP3M1Q9Y2T2 418 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 NEUROG3Q9Y4Z2 214 aa9.79□□□□□ -0.84
RAB5B-206ENST00000549505 A0A0U1RQS6 177 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 EDDM13A0A1B0GTR0 161 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 A6NHS1 94 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 TTC34A8MYJ7 566 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 PDE5AO76074 875 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 UGT2B4P06133 528 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 CALRP27797 417 aaKnown RBP9.78□□□□□ -0.84
RAB5B-206ENST00000549505 NNMTP40261 264 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 TAF11Q15544 211 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 HNRNPA1L2Q32P51 320 aaKnown RBP9.78□□□□□ -0.84
RAB5B-206ENST00000549505 C10orf62Q5T681 223 aaPredicted RBP9.78□□□□□ -0.84
RAB5B-206ENST00000549505 LIPIQ6XZB0 460 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 NPAS3Q8IXF0 933 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 PBXIP1Q96AQ6 731 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 NOL11Q9H8H0 719 aaKnown RBP9.78□□□□□ -0.84
RAB5B-206ENST00000549505 C8orf4Q9NR00 106 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 CNOT6Q9ULM6 557 aaKnown RBP9.78□□□□□ -0.84
RAB5B-206ENST00000549505 WNT6Q9Y6F9 365 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 C17orf113A0A1B0GUU1 675 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 NPC1O15118 1278 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 DENRO43583 198 aaKnown RBP9.78□□□□□ -0.84
RAB5B-206ENST00000549505 SORBS2O94875 1100 aaKnown RBP9.78□□□□□ -0.84
RAB5B-206ENST00000549505 OR4F21O95013 312 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 SOD1P00441 154 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 ANXA5P08758 320 aa9.78□□□□□ -0.84
RAB5B-206ENST00000549505 EN2P19622 333 aaPredicted RBP9.78□□□□□ -0.84
RAB5B-206ENST00000549505 RECQLP46063 649 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms