RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 MASP1P48740 699 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 BMXP51813 675 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 ATXN7L2Q5T6C5 722 aaPredicted RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 DET1Q7L5Y6 550 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 RAB44Q7Z6P3 723 aaPredicted RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 CLYBLQ8N0X4 340 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 BBS5Q8N3I7 341 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 RNF175Q8N4F7 328 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 AUTS2Q8WXX7 1259 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 PEX13Q92968 403 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 FEM1CQ96JP0 617 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 POLR1EQ9GZS1 481 aaKnown RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 MRPL40Q9NQ50 206 aaKnown RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 FKBPLQ9UIM3 349 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 RIMKLBQ9ULI2 386 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 SH3BP1Q9Y3L3 701 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 SLC22A2O15244 555 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 SNAP91O60641 907 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 NOL3O60936 208 aaKnown RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 PFKLP17858 780 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 IMPDH1P20839 514 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 PSMA3P25788 255 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 NR1D2Q14995 579 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 SF1Q15637 639 aaKnown RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 CYP2A13Q16696 494 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 ZNF549Q6P9A3 640 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 BORAQ6PGQ7 559 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 CILP2Q8IUL8 1156 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 ADGRG5Q8IZF4 528 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 SLC15A4Q8N697 577 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 DDHD1Q8NEL9 900 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 EEF1AKMT1Q8WVE0 214 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 PYCR2Q96C36 320 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 PLEKHA8Q96JA3 519 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 PSKH2Q96QS6 385 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 C17orf80Q9BSJ5 609 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 MIR1-1HGQ9H1L0 117 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 IFT80Q9P2H3 777 aaPredicted RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 POLG2Q9UHN1 485 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 PNMA8BQ9ULN7 279 aaPredicted RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 ST14Q9Y5Y6 855 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 DENND4CQ5VZ89 1909 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 MYO1GB0I1T2 1018 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 BMP2P12643 396 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 CR2P20023 1033 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 RPS9P46781 194 aaKnown RBP10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SGSHP51688 502 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 KCNK10P57789 538 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 OCA2Q04671 838 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 ACVR1Q04771 509 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 GTF2H3Q13889 308 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 GTDC1Q4AE62 458 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 CXorf57Q6NSI4 855 aaKnown RBP10.91□□□□□ -0.66
LINC00661-204ENST00000549354 ABRAXAS1Q6UWZ7 409 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 ANGPTL8Q6UXH0 198 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 FRA10AC1Q70Z53 315 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 TMC8Q8IU68 726 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 PIANPQ8IYJ0 282 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 METTL6Q8TCB7 284 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 CENPNQ96H22 339 aaPredicted RBP10.91□□□□□ -0.66
LINC00661-204ENST00000549354 TRIB3Q96RU7 358 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 CHID1Q9BWS9 393 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SH3GLB1Q9Y371 365 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SPO11Q9Y5K1 396 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 TGM5O43548 720 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 C1RP00736 705 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 ALBP02768 609 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SLC2A4P14672 509 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 FSHRP23945 695 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 AQP1P29972 269 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 HMOX2P30519 316 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 OR4D2P58180 307 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 TRAP1Q12931 704 aaKnown RBP10.91□□□□□ -0.66
LINC00661-204ENST00000549354 PPIGQ13427 754 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SELPLGQ14242 412 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 KIAA0408Q6ZU52 694 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 GLT6D1Q7Z4J2 308 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 CCDC138Q96M89 665 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 FAM210AQ96ND0 272 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 AGPAT4Q9NRZ5 378 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 FARSBQ9NSD9 589 aaKnown RBP10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SMPD3Q9NY59 655 aaPredicted RBP10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SUN2Q9UH99 717 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 CNOT11Q9UKZ1 510 aaKnown RBP10.91□□□□□ -0.66
LINC00661-204ENST00000549354 GSTA4O15217 222 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 S1PR4O95977 384 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 FGBP02675 491 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 FUCA1P04066 466 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 TCF3P15923 654 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SLC7A9P82251 487 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 CLCQ05315 142 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 ACAP2Q15057 778 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 TGFBIQ15582 683 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 CPSF6Q16630 551 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC00661-204ENST00000549354 EGFLAMQ63HQ2 1017 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 PSAPL1Q6NUJ1 521 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 SPESP1Q6UW49 350 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 FAM151BQ6UXP7 276 aa10.91□□□□□ -0.66
LINC00661-204ENST00000549354 GCNT7Q6ZNI0 430 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms