RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 NFKB1P19838 968 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 PTGER4P35408 488 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 NAP1L1P55209 391 aaKnown RBP11.91□□□□□ -0.5
DDX54-206ENST00000549271 XRCC4Q13426 336 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 PCSK7Q16549 785 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 ZNF517Q6ZMY9 492 aaPredicted RBP11.91□□□□□ -0.5
DDX54-206ENST00000549271 KIAA1328Q86T90 577 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 ZNF547Q8IVP9 402 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 INPP5DQ92835 1189 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 OXNAD1Q96HP4 312 aaPredicted RBP11.91□□□□□ -0.5
DDX54-206ENST00000549271 QKIQ96PU8 341 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDX54-206ENST00000549271 OSBPL8Q9BZF1 889 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 OSGEPL1Q9H4B0 414 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 SLC40A1Q9NP59 571 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 ARFGAP3Q9NP61 516 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 ITGB1BP2Q9UKP3 347 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 SHOC2Q9UQ13 582 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 COPG1Q9Y678 874 aaKnown RBP11.91□□□□□ -0.5
DDX54-206ENST00000549271 ANKHD1Q8IWZ3 2542 aaKnown RBP11.9□□□□□ -0.5
DDX54-206ENST00000549271 LOC285095A0A1B0GVY8 99 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 A6NL46 340 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 CDK14O94921 469 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 TYRP1P17643 537 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 AMD1P17707 334 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 NELFEP18615 380 aaKnown RBP11.9□□□□□ -0.5
DDX54-206ENST00000549271 IDSP22304 550 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 RBL1P28749 1068 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 CAPZBP47756 277 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 WNT3AP56704 352 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 RWDD2BP57060 319 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 OTUD4Q01804 1114 aaKnown RBP11.9□□□□□ -0.5
DDX54-206ENST00000549271 NOMO1Q15155 1222 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 INSCQ1MX18 579 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 ZNF648Q5T619 568 aaPredicted RBP11.9□□□□□ -0.5
DDX54-206ENST00000549271 IZUMO3Q5VZ72 239 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 ALS2CLQ60I27 953 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 CYB5D1Q6P9G0 228 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 PID1Q7Z2X4 250 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 C11orf96Q7Z7L8 435 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 TRIM48Q8IWZ4 208 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 TMEM102Q8N9M5 508 aaPredicted RBP11.9□□□□□ -0.5
DDX54-206ENST00000549271 ACTL9Q8TC94 416 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 BRSK1Q8TDC3 778 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 ZDHHC12Q96GR4 267 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 MRGPRX2Q96LB1 330 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 FCRL5Q96RD9 977 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 GPR63Q9BZJ6 419 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 PDE7BQ9NP56 450 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 FAM153AQ9UHL3 310 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 TMPRSS11EQ9UL52 423 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 SPO11Q9Y5K1 396 aa11.9□□□□□ -0.5
DDX54-206ENST00000549271 MACROD2A1Z1Q3 448 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 PDZK1P1A8MUH7 402 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 F5H423 210 aaPredicted RBP11.89□□□□□ -0.51
DDX54-206ENST00000549271 H7C0C1 242 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 AURKAO14965 403 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 DDX3YO15523 660 aaKnown RBP11.89□□□□□ -0.51
DDX54-206ENST00000549271 RASSF9O75901 435 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 EPOP01588 193 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 VCLP18206 1134 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 HMGCLP35914 325 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 ATP5OP48047 213 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 DMPKQ09013 629 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 KIF5AQ12840 1032 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 TMEM115Q12893 351 aaPredicted RBP11.89□□□□□ -0.51
DDX54-206ENST00000549271 KHDC1Q4VXA5 237 aaKnown RBP11.89□□□□□ -0.51
DDX54-206ENST00000549271 VWA5B1Q5TIE3 1220 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 CACHD1Q5VU97 1274 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 ZDHHC20Q5W0Z9 365 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 CCDC70Q6NSX1 233 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 CRTC3Q6UUV7 619 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 IGFL3Q6UXB1 125 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 MED25Q71SY5 747 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 VAT1Q99536 393 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 FAM118BQ9BPY3 351 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 GORASP1Q9BQQ3 440 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 TRABDQ9H4I3 376 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.89□□□□□ -0.51
DDX54-206ENST00000549271 KLHL8Q9P2G9 620 aaPredicted RBP11.89□□□□□ -0.51
DDX54-206ENST00000549271 TRHDEQ9UKU6 1024 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 AMFRQ9UKV5 643 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 RARRES3Q9UL19 164 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 PACSIN2Q9UNF0 486 aaPredicted RBP11.89□□□□□ -0.51
DDX54-206ENST00000549271 MYO7BQ6PIF6 2116 aa11.89□□□□□ -0.51
DDX54-206ENST00000549271 E2F3O00716 465 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 MTX2O75431 263 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 FTCDO95954 541 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 FOLR1P15328 257 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 RPL10P27635 214 aaKnown RBP11.88□□□□□ -0.51
DDX54-206ENST00000549271 CHRNA4P43681 627 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 ART3Q13508 389 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 TUBB3Q13509 450 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 GPR18Q14330 331 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 PLA2G4EQ3MJ16 856 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 ATP13A5Q4VNC0 1218 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 SIRPB2Q5JXA9 342 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 PEX26Q7Z412 305 aa11.88□□□□□ -0.51
DDX54-206ENST00000549271 BPHLQ86WA6 291 aaPredicted RBP11.88□□□□□ -0.51
DDX54-206ENST00000549271 TTC30BQ8N4P2 665 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms