RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 DCTP40126 519 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 ADAM17P78536 824 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 RAPSNQ13702 412 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 DGCR6Q14129 220 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 CATSPEREQ5SY80 951 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 DEPDC1Q5TB30 811 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 MSANTD2Q6P1R3 559 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 FAM171BQ6P995 826 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 SVOPLQ8N434 492 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 OR10T2Q8NGX3 314 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 HASPINQ8TF76 798 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 RORBQ92753 470 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 GORASP2Q9H8Y8 452 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 C3orf18Q9UK00 162 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 POU2F3Q9UKI9 436 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 ANKRD36A6QL64 1941 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 E2F3O00716 465 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 BCKDKO14874 412 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 ANKRD28O15084 1053 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 PFDN6O15212 129 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 MITFO75030 526 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-228ENST00000548938 FMO3P31513 532 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 RCVRNP35243 200 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 PSEN2P49810 448 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 CPT1AP50416 773 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 SCNN1GP51170 649 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 SREBF2Q12772 1141 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 CDK5R2Q13319 367 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 NR6A1Q15406 480 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 DGUOKQ16854 277 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 CCDC81Q6ZN84 652 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 PRR23BQ6ZRT6 265 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 TEX26Q8N6G2 289 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 OR8J3Q8NGG0 315 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 DYNC2LI1Q8TCX1 351 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 FAM162AQ96A26 154 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 RHBDF1Q96CC6 855 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 RHNO1Q9BSD3 238 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 THUMPD3Q9BV44 507 aaKnown RBP13.51□□□□□ -0.25
HDAC7-228ENST00000548938 AP5M1Q9H0R1 490 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 ANKMY1Q9P2S6 941 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 TMEFF2Q9UIK5 374 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-228ENST00000548938 ABT1Q9ULW3 272 aaKnown RBP13.51□□□□□ -0.25
HDAC7-228ENST00000548938 A0A1W2PQH9 124 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 ZBBXA8MT70 800 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 KLK8O60259 260 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 ANGPTL1O95841 491 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 FTH1P02794 183 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 CAPN1P07384 714 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 CCDC159P0C7I6 412 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 PFKLP17858 780 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 CD6P30203 668 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 TGFBR1P36897 503 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 BRCC3P46736 316 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 HIST2H2ACQ16777 129 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 TXNDC11Q6PKC3 985 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 IL27RAQ6UWB1 636 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 P2RY8Q86VZ1 359 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 CDKN2AIPNLQ96HQ2 116 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 ARHGAP39Q9C0H5 1083 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 RMI1Q9H9A7 625 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 SIAEQ9HAT2 523 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 SPC25Q9HBM1 224 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 NECTIN3Q9NQS3 549 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 PCDHGA10Q9Y5H3 936 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 PRMT5O14744 637 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 TSPAN12O95859 305 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 FGF1P05230 155 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 MASP1P48740 699 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 CDKN1CP49918 316 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 CRYBB1P53674 252 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 ILF2Q12905 390 aaKnown RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 SLC13A2Q13183 592 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 ACOX1Q15067 660 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 CARTPTQ16568 116 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 LAIR1Q6GTX8 287 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 LINC00299Q6ZSB3 139 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 GALNT5Q7Z7M9 940 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 CIR1Q86X95 450 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 DCP2Q8IU60 420 aaKnown RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 ZNF683Q8IZ20 524 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 EID3Q8N140 333 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 SIDT2Q8NBJ9 832 aaKnown RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 TRPV1Q8NER1 839 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 YIPF6Q96EC8 236 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 ZNF300Q96RE9 604 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 ZNF382Q96SR6 550 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 PRDM5Q9NQX1 630 aaPredicted RBP13.5□□□□□ -0.25
HDAC7-228ENST00000548938 CD274Q9NZQ7 290 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 ZNF229Q9UJW7 825 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 Q9Y3F1 56 aa13.5□□□□□ -0.25
HDAC7-228ENST00000548938 TTC34A8MYJ7 566 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 LSM1O15116 133 aaKnown RBP13.49□□□□□ -0.25
HDAC7-228ENST00000548938 NIPSNAP2O75323 286 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 RHOQP17081 205 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 PSMB9P28065 219 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 CD40LGP29965 261 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 TM4SF4P48230 202 aa13.49□□□□□ -0.25
HDAC7-228ENST00000548938 SERPINB10P48595 397 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms