RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 MDFICQ9P1T7 246 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 FETUBQ9UGM5 382 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 FBXW2Q9UKT8 454 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 PCDHA12Q9UN75 941 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 PIN4Q9Y237 131 aaKnown RBP4.19□□□□□ -1.74
SCAF11-210ENST00000547654 ACEP12821 1306 aa4.19□□□□□ -1.74
SCAF11-210ENST00000547654 TEX14Q8IWB6 1497 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 SIGLEC1Q9BZZ2 1709 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 CKAP5Q14008 2032 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 EVPLQ92817 2033 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 IGLV5-39A0A0G2JS06 123 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 TMEM202A6NGA9 273 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 C4orf47A7E2U8 309 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 FAM86B1E9PN63 330 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 INPPL1O15357 1258 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 KLK8O60259 260 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 CRCPO75575 148 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 SYF2O95926 243 aaKnown RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 HEXBP07686 556 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 MMP3P08254 477 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 FAM86B2P0C5J1 330 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 TFEBP19484 476 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 UBA1P22314 1058 aaKnown RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 MYF6P23409 242 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 PRPHP41219 470 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 TKTL1P51854 596 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 HTD2P86397 168 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 KLHL30Q0D2K2 578 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 PMPCAQ10713 525 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 RPS6KA1Q15418 735 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 PLEKHO1Q53GL0 409 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 KIAA1755Q5JYT7 1200 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 HIST2H2BCQ6DN03 193 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 HIST2H2BDQ6DRA6 164 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 C15orf39Q6ZRI6 1047 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 CACNA2D4Q7Z3S7 1137 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 TRIM74Q86UV6 250 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 TRIM73Q86UV7 250 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 CNTN4Q8IWV2 1026 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 ARL14EPQ8N8R7 260 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 SCCPDHQ8NBX0 429 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 CMASQ8NFW8 434 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 CCDC110Q8TBZ0 833 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 SLC13A3Q8WWT9 602 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 PRCCQ92733 491 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 CENPTQ96BT3 561 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 TRIM44Q96DX7 344 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 EEF2KMTQ96G04 330 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 EGLN2Q96KS0 407 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 ACOX2Q99424 681 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 TMEM204Q9BSN7 226 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 TRIM7Q9C029 511 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 FZD8Q9H461 694 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 MOV10Q9HCE1 1003 aaKnown RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 EQTNQ9NQ60 294 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 COMMD8Q9NX08 183 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 CISD1Q9NZ45 108 aaKnown RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 DBNLQ9UJU6 430 aaKnown RBP4.18□□□□□ -1.74
SCAF11-210ENST00000547654 DUSP12Q9UNI6 340 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 AURKCQ9UQB9 309 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 RAP2CQ9Y3L5 183 aa4.18□□□□□ -1.74
SCAF11-210ENST00000547654 ABCC2Q92887 1545 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 RGSL1A5PLK6 1076 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 ZBTB43O43298 467 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 SOCS5O75159 536 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 NEURL1O76050 574 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 ICAM1P05362 532 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 CCDC192P0DO97 292 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 UNGP13051 313 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-210ENST00000547654 FERP16591 822 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 GNAZP19086 355 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 EPORP19235 508 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 CD58P19256 250 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 KCNA5P22460 613 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 CHATP28329 748 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 KCNJ1P48048 391 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 CASP9P55211 416 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 GMFBP60983 142 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 ZXDBP98169 803 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 PPP2R2BQ00005 443 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 STIM1Q13586 685 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 TRIM29Q14134 588 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 IFI44LQ53G44 452 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 SGO1Q5FBB7 561 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 SIGIRRQ6IA17 410 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 TLK2Q86UE8 772 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 SFRP1Q8N474 314 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 MRPL43Q8N983 215 aaKnown RBP4.17□□□□□ -1.74
SCAF11-210ENST00000547654 ZBTB44Q8NCP5 570 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 ZNF540Q8NDQ6 660 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 NEK11Q8NG66 645 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 ATL1Q8WXF7 558 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 KAT2AQ92830 837 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 BSCL2Q96G97 398 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-210ENST00000547654 FAM111AQ96PZ2 611 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 SH3GL2Q99962 352 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 AKIRIN1Q9H9L7 192 aaPredicted RBP4.17□□□□□ -1.74
SCAF11-210ENST00000547654 LIN28AQ9H9Z2 209 aaKnown RBP4.17□□□□□ -1.74
SCAF11-210ENST00000547654 C17orf75Q9HAS0 396 aa4.17□□□□□ -1.74
SCAF11-210ENST00000547654 TMEM161AQ9NX61 479 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms