RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TDRD7Q8NHU6 1098 aaKnown RBP3.6□□□□□ -1.83
CCDC38-204ENST00000546816 ZNF414Q96IQ9 312 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 DDOQ99489 341 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 MUC13Q9H3R2 512 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 INTS9Q9NV88 658 aaKnown RBP3.6□□□□□ -1.83
CCDC38-204ENST00000546816 NPAP1Q9NZP6 1156 aa3.6□□□□□ -1.83
CCDC38-204ENST00000546816 CORO1CQ9ULV4 474 aaPredicted RBP3.6□□□□□ -1.83
CCDC38-204ENST00000546816 FRMD3A2A2Y4 597 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 SRSF10O75494 262 aaKnown RBP3.59□□□□□ -1.83
CCDC38-204ENST00000546816 OR2C1O95371 312 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 MOCS3O95396 460 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 DDX58O95786 925 aaKnown RBP3.59□□□□□ -1.83
CCDC38-204ENST00000546816 NMBRP28336 390 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 PSMC4P43686 418 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 SLC6A12P48065 614 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 RPS18P62269 152 aaKnown RBP3.59□□□□□ -1.83
CCDC38-204ENST00000546816 GCNT6Q5T4J0 391 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 KIAA0930Q6ICG6 404 aaPredicted RBP3.59□□□□□ -1.83
CCDC38-204ENST00000546816 KLHL35Q6PF15 583 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 CORO6Q6QEF8 472 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 SARM1Q6SZW1 724 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 METTL7BQ6UX53 244 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 PDILTQ8N807 584 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 AMER3Q8N944 861 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 NAXEQ8NCW5 288 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 OR2T11Q8NH01 316 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 FGFBP3Q8TAT2 258 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 TBC1D16Q8TBP0 767 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 SGK494Q96LW2 274 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 PPM1MQ96MI6 270 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 C7orf26Q96N11 449 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 ABHD6Q9BV23 337 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 SLC26A6Q9BXS9 759 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 LAT2Q9GZY6 243 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 MYH16Q9H6N6 1097 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 ACKR4Q9NPB9 350 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 SMC4Q9NTJ3 1288 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 PNMA2Q9UL42 364 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 CMAHPQ9Y471 501 aa3.59□□□□□ -1.83
CCDC38-204ENST00000546816 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.59□□□□□ -1.83
CCDC38-204ENST00000546816 ADAMTS9Q9P2N4 1935 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 AGRNO00468 2067 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 A0A1W2PR77 199 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 TO15178 435 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 NDUFS4O43181 175 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 HS6ST1O60243 411 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 RNASEH2AO75792 299 aaKnown RBP3.58□□□□□ -1.84
CCDC38-204ENST00000546816 SRPRAP08240 638 aaKnown RBP3.58□□□□□ -1.84
CCDC38-204ENST00000546816 GATA1P15976 413 aaPredicted RBP3.58□□□□□ -1.84
CCDC38-204ENST00000546816 CAMPP49913 170 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 GPR17Q13304 367 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 SNAI3Q3KNW1 292 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 ADALQ6DHV7 355 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 ZNF554Q86TJ5 538 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 TMTC2Q8N394 836 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 NGEFQ8N5V2 710 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 TMEM178AQ8NBL3 297 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 HPSE2Q8WWQ2 592 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 MYADMQ96S97 322 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 NCAPGQ9BPX3 1015 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 RNF186Q9NXI6 227 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 FLRT3Q9NZU0 649 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 NENFQ9UMX5 172 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 LYVE1Q9Y5Y7 322 aa3.58□□□□□ -1.84
CCDC38-204ENST00000546816 SPIN1Q9Y657 262 aaPredicted RBP3.58□□□□□ -1.84
CCDC38-204ENST00000546816 PRSS51A0A1B0GVH4 220 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 ELOVL7A1L3X0 281 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 E9PI62 339 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 ATP6V0E1O15342 81 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 LAMP2P13473 410 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 PNRC1Q12796 327 aaPredicted RBP3.57□□□□□ -1.84
CCDC38-204ENST00000546816 IKQ13123 557 aaPredicted RBP3.57□□□□□ -1.84
CCDC38-204ENST00000546816 TEAD2Q15562 447 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 GRTP1Q5TC63 336 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 PSRC1Q6PGN9 363 aaPredicted RBP3.57□□□□□ -1.84
CCDC38-204ENST00000546816 LINGO4Q6UY18 593 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 MMS22LQ6ZRQ5 1243 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
CCDC38-204ENST00000546816 ARID3BQ8IVW6 561 aaPredicted RBP3.57□□□□□ -1.84
CCDC38-204ENST00000546816 SCYL3Q8IZE3 742 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 CPSF7Q8N684 471 aaKnown RBP3.57□□□□□ -1.84
CCDC38-204ENST00000546816 OR1J1Q8NGS3 322 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 ZNRF4Q8WWF5 429 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 POMGNT1Q8WZA1 660 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 CMTM3Q96MX0 182 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 PKP2Q99959 881 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 FGFBP2Q9BYJ0 223 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 DNAJC18Q9H819 358 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 DIAPH3Q9NSV4 1193 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 TAB2Q9NYJ8 693 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 FBXL17Q9UF56 701 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 PCDHGA5Q9Y5G8 931 aa3.57□□□□□ -1.84
CCDC38-204ENST00000546816 TDRD9Q8NDG6 1382 aaKnown RBP3.56□□□□□ -1.84
CCDC38-204ENST00000546816 ASTN2O75129 1339 aaPredicted RBP3.56□□□□□ -1.84
CCDC38-204ENST00000546816 IGLV7-46A0A075B6I9 117 aa3.56□□□□□ -1.84
CCDC38-204ENST00000546816 MED19A0JLT2 244 aaPredicted RBP3.56□□□□□ -1.84
CCDC38-204ENST00000546816 B4E171 279 aa3.56□□□□□ -1.84
CCDC38-204ENST00000546816 KHDRBS3O75525 346 aaKnown RBP3.56□□□□□ -1.84
CCDC38-204ENST00000546816 CDC123O75794 336 aaPredicted RBP3.56□□□□□ -1.84
CCDC38-204ENST00000546816 PIGNO95427 931 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms