RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 SYT3Q9BQG1 590 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 LRRC1Q9BTT6 524 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 DDA1Q9BW61 102 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 RAB17Q9H0T7 212 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 GPN2Q9H9Y4 310 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 SMURF1Q9HCE7 757 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 RIC8BQ9NVN3 520 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 HAUS2Q9NVX0 235 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 INTUQ9ULD6 942 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 TTC7AQ9ULT0 858 aaPredicted RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 ENTPD4Q9Y227 616 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 OR51B4Q9Y5P0 310 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 FADS3Q9Y5Q0 445 aa6.61□□□□□ -1.35
CCDC60-205ENST00000546345 PRRC2AP48634 2157 aaKnown RBP6.61□□□□□ -1.35
CCDC60-205ENST00000546345 IGHV5-10-1A0A0J9YXX1 117 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 MKRN2OSH3BPM6 223 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 K7ERQ8 282 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 ZNF821O75541 412 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 HEXIM1O94992 359 aaKnown RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 MOCS3O95396 460 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 GNA14O95837 355 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 MT-CO1P00395 513 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 AGTP01019 485 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 HLA-DRAP01903 254 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 FYNP06241 537 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 SRCP12931 536 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 ADRB3P13945 408 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 CHRNA3P32297 505 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 RAD23BP54727 409 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 TBX4P57082 545 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 RPS21P63220 83 aaKnown RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 B4GALNT1Q00973 533 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 TMED1Q13445 227 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 HLTFQ14527 1009 aaKnown RBP eCLIP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 ZNF460Q14592 562 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 TMEM177Q53S58 311 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 ODF2Q5BJF6 829 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 RRAGBQ5VZM2 374 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 RAP1GAP2Q684P5 730 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 ANKS6Q68DC2 871 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 ARHGAP17Q68EM7 881 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 LINGO4Q6UY18 593 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 BZW1Q7L1Q6 419 aaKnown RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 PARS2Q7L3T8 475 aaKnown RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 PIGWQ7Z7B1 504 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 NELFCDQ8IXH7 590 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 SYCE1Q8N0S2 351 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 LGI2Q8N0V4 545 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 SLC4A11Q8NBS3 891 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 DENND6BQ8NEG7 585 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 CLEC4CQ8WTT0 213 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 RNF139Q8WU17 664 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 NSMCE1Q8WV22 266 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 NELFBQ8WX92 580 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 TAF4BQ92750 862 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 FUBP1Q96AE4 644 aaKnown RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 ARL8AQ96BM9 186 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 PDXPQ96GD0 296 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 LURAP1Q96LR2 239 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 LENG8Q96PV6 779 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 TAAR9Q96RI9 348 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 PSMB7Q99436 277 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 PRMT1Q99873 361 aaKnown RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 TUBB6Q9BUF5 446 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 ROPN1BQ9BZX4 212 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 CENPHQ9H3R5 247 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 ROPN1Q9HAT0 212 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 CHCHD3Q9NX63 227 aaKnown RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 LUZP4Q9P127 313 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 RCOR3Q9P2K3 495 aaPredicted RBP6.6□□□□□ -1.35
CCDC60-205ENST00000546345 TLK1Q9UKI8 766 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 GPR34Q9UPC5 381 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 HS3ST2Q9Y278 367 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 LRRC42Q9Y546 428 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 PCDHA13Q9Y5I0 950 aa6.6□□□□□ -1.35
CCDC60-205ENST00000546345 A0A0A6YYK5 440 aaPredicted RBP6.59□□□□□ -1.35
CCDC60-205ENST00000546345 TYW5A2RUC4 315 aaKnown RBP6.59□□□□□ -1.35
CCDC60-205ENST00000546345 IGLON5A6NGN9 336 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 FAM90A27PA6NNH2 459 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 ACOT7O00154 380 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 FPGTO14772 594 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 XPO1O14980 1071 aaKnown RBP6.59□□□□□ -1.35
CCDC60-205ENST00000546345 B4GAT1O43505 415 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 SMAD6O43541 496 aaKnown RBP6.59□□□□□ -1.35
CCDC60-205ENST00000546345 AP1G1O43747 822 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 AKR1B10O60218 316 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 SNAP91O60641 907 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 RFPL1O75677 317 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 SUN1O94901 812 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 ANP32DO95626 131 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 MOCS2O96007 188 aaPredicted RBP6.59□□□□□ -1.35
CCDC60-205ENST00000546345 KRT14P02533 472 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 RPN1P04843 607 aaKnown RBP6.59□□□□□ -1.35
CCDC60-205ENST00000546345 P4HA1P13674 534 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 TACR2P21452 398 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 PAX7P23759 505 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 HSD3B2P26439 372 aa6.59□□□□□ -1.35
CCDC60-205ENST00000546345 CTNNA1P35221 906 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms