RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 C10orf88Q9H8K7 445 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 KLHL8Q9P2G9 620 aaPredicted RBP12.21□□□□□ -0.45
COPS7A-221ENST00000546229 PLEKHB1Q9UF11 243 aaPredicted RBP12.21□□□□□ -0.45
COPS7A-221ENST00000546229 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 TCFL5Q9UL49 500 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 ACSL5Q9ULC5 683 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 INTUQ9ULD6 942 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 PIKFYVEQ9Y2I7 2098 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 TRBV5-4A0A0C4DH59 114 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 UBA6A0AVT1 1052 aaPredicted RBP12.2□□□□□ -0.46
COPS7A-221ENST00000546229 KLHL33A6NCF5 533 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 SLC9B1P1A6NJY1 282 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 MEN1O00255 615 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 BTN3A3O00478 584 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 DDX3YO15523 660 aaKnown RBP12.2□□□□□ -0.46
COPS7A-221ENST00000546229 HCRTR1O43613 425 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 AKR1B10O60218 316 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 SRP72O76094 671 aaKnown RBP12.2□□□□□ -0.46
COPS7A-221ENST00000546229 ST6GAL1P15907 406 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 TPM4P67936 248 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 XRCC4Q13426 336 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 TAF1AQ15573 450 aaPredicted RBP12.2□□□□□ -0.46
COPS7A-221ENST00000546229 LONRF2Q1L5Z9 754 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 TFDP3Q5H9I0 405 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 SLC6A19Q695T7 634 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 CCDC70Q6NSX1 233 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 JMJD6Q6NYC1 403 aaPredicted RBP12.2□□□□□ -0.46
COPS7A-221ENST00000546229 BBS12Q6ZW61 710 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 BZW1Q7L1Q6 419 aaKnown RBP12.2□□□□□ -0.46
COPS7A-221ENST00000546229 TMEM126BQ8IUX1 230 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 TMEM151BQ8IW70 566 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 GLIS1Q8NBF1 620 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 OR4K2Q8NGD2 314 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 OR13C4Q8NGS5 318 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 FLVCR1-AS1Q8TAF5 88 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 HM13Q8TCT9 377 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 KRT35Q92764 455 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 MR1Q95460 341 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 TTC25Q96NG3 672 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 C19orf43Q9BQ61 176 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 FICDQ9BVA6 458 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 PKP3Q9Y446 797 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 PCDHGB7Q9Y5F8 929 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 ALG6Q9Y672 507 aa12.2□□□□□ -0.46
COPS7A-221ENST00000546229 WIPF3A6NGB9 483 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 TTLL8A6PVC2 850 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 HACD1B0YJ81 288 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 BTN3A1O00481 513 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 KLF7O75840 302 aaPredicted RBP12.19□□□□□ -0.46
COPS7A-221ENST00000546229 SLC35G4P0C7Q5 338 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 POLR2CP19387 275 aaPredicted RBP12.19□□□□□ -0.46
COPS7A-221ENST00000546229 MSH3P20585 1137 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 RBL1P28749 1068 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 AKT1P31749 480 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 GSDMDP57764 484 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 RPS15P62841 145 aaKnown RBP12.19□□□□□ -0.46
COPS7A-221ENST00000546229 TBX2Q13207 712 aaPredicted RBP12.19□□□□□ -0.46
COPS7A-221ENST00000546229 KAZNQ674X7 775 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 SYTL1Q8IYJ3 562 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 ADGRF3Q8IZF5 1079 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 NXPE1Q8N323 547 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 SMAD5Q99717 465 aaKnown RBP12.19□□□□□ -0.46
COPS7A-221ENST00000546229 DEF6Q9H4E7 631 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 COG4Q9H9E3 785 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 C1GALT1Q9NS00 363 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 RSPH14Q9UHP6 348 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 TRHDEQ9UKU6 1024 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 TFR2Q9UP52 801 aa12.19□□□□□ -0.46
COPS7A-221ENST00000546229 C17orf113A0A1B0GUU1 675 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 TCP11X1B4DZS4 312 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 GOLGA6L19H0YKK7 550 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 APOC4-APOC2K7ER74 178 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 STX7O15400 261 aaKnown RBP12.18□□□□□ -0.46
COPS7A-221ENST00000546229 LDB2O43679 373 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 SPOPO43791 374 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 CNOT3O75175 753 aaKnown RBP12.18□□□□□ -0.46
COPS7A-221ENST00000546229 TMEM63AO94886 807 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 APOC2P02655 101 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 CTSBP07858 339 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 PRSS56P0CW18 603 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 TPBGLP0DKB5 382 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 PYGMP11217 842 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 TNNT1P13805 278 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 PVRP15151 417 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 PSMB4P28070 264 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 PDHA2P29803 388 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 PRDX3P30048 256 aaKnown RBP12.18□□□□□ -0.46
COPS7A-221ENST00000546229 GCGRP47871 477 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 LMAN1P49257 510 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 CDKN1CP49918 316 aaPredicted RBP12.18□□□□□ -0.46
COPS7A-221ENST00000546229 CCL11P51671 97 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 VAV2P52735 878 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 MRPL49Q13405 166 aaKnown RBP12.18□□□□□ -0.46
COPS7A-221ENST00000546229 ATP1A4Q13733 1029 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 BOP1Q14137 746 aaKnown RBP12.18□□□□□ -0.46
COPS7A-221ENST00000546229 NCF4Q15080 339 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 INPP5JQ15735 1006 aaPredicted RBP12.18□□□□□ -0.46
COPS7A-221ENST00000546229 ZIC1Q15915 447 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 PTCHD3Q3KNS1 767 aa12.18□□□□□ -0.46
COPS7A-221ENST00000546229 CRB2Q5IJ48 1285 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms