RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 MOSPD1Q9UJG1 213 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 SLC6A14Q9UN76 642 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 PLLPQ9Y342 182 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 GPSM3Q9Y4H4 160 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 TMEM131Q92545 1883 aa15.69■□□□□ 0.1
PRPF40A-212ENST00000545856 PABPN1LA6NDY0 278 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 FOXD2O60548 495 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 KERAO60938 352 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 LRP3O75074 770 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 MATN4O95460 622 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 FUCA1P04066 466 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 F7P08709 466 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 ACP5P13686 325 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 JUNDP17535 347 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 PPP2R2AP63151 447 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 CDKL1Q00532 357 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 CSHL1Q14406 222 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 SEPT7Q16181 437 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 ZNF423Q2M1K9 1284 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 UAP1L1Q3KQV9 507 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 ACSBG2Q5FVE4 666 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 METTL2BQ6P1Q9 378 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 TMEM207Q6UWW9 146 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 GKN2Q86XP6 184 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 SPATS2Q86XZ4 545 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 RASGRP3Q8IV61 690 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 EEF1AKMT1Q8WVE0 214 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 ZFPM2Q8WW38 1151 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 SREK1Q8WXA9 508 aaKnown RBP15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 PIGKQ92643 395 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 TSACCQ96A04 125 aaPredicted RBP15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 TRIM54Q9BYV2 358 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 OR52A5Q9H2C5 316 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 CAPN10Q9HC96 672 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 IGSF5Q9NSI5 407 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 KLC4Q9NSK0 619 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 NKIRAS1Q9NYS0 192 aa15.68■□□□□ 0.1
PRPF40A-212ENST00000545856 ANKRD12Q6UB98 2062 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 GFYI3L273 518 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 PSIP1O75475 530 aaKnown RBP15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 CER1O95813 267 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 CATP04040 527 aaKnown RBP15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 ITGB6P18564 788 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 NR1D1P20393 614 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 CYP2A7P20853 494 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 CSNK1EP49674 416 aaKnown RBP15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 PRKAA2P54646 552 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 NFE2L1Q14494 772 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 ZNF460Q14592 562 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 PPM1JQ5JR12 505 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 KCTD16Q68DU8 428 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 TTC23LQ6PF05 361 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 RBM12BQ8IXT5 1001 aaKnown RBP15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 ANKRD49Q8WVL7 239 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 ASB11Q8WXH4 323 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 GPR78Q96P69 363 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 ELF4Q99607 663 aaPredicted RBP15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 SLC30A3Q99726 388 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 SLC12A9Q9BXP2 914 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 MRPL40Q9NQ50 206 aaKnown RBP15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 DNAJC28Q9NX36 388 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 SLCO1B1Q9Y6L6 691 aa15.67■□□□□ 0.1
PRPF40A-212ENST00000545856 KIR2DS5A0A0G2JLQ3 304 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 A0A0G2JNG1 304 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 A0A1B0GVT2 93 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 TMEM120BA0PK00 339 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 NEMP2A6NFY4 417 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 LMO7DNF2Z398 122 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 GOLGA8RI6L899 631 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 KIR2DS3K7RE56 304 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 ZBTB14O43829 449 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 PLIN3O60664 434 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 RETP07949 1114 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 ZNF883P0CG24 379 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 F3P13726 295 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 TAC1P20366 129 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 ACADLP28330 430 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 ASPHQ12797 758 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 KIR2DS5Q14953 304 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 TECRLQ5HYJ1 363 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 CAPRIN2Q6IMN6 1127 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 CYHR1Q6ZMK1 362 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 KDM7AQ6ZMT4 941 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 ISCA2Q86U28 154 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 HOMEZQ8IX15 550 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 TCAIMQ8N3R3 496 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 KCTD4Q8WVF5 259 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 LRRC61Q9BV99 259 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 NUSAP1Q9BXS6 441 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 TMEM168Q9H0V1 697 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 MVB12BQ9H7P6 319 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 TMEM74BQ9NUR3 256 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 FAM53CQ9NYF3 392 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 NUDT4Q9NZJ9 180 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 GALPQ9UBC7 116 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 SLC23A2Q9UGH3 650 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 POLG2Q9UHN1 485 aa15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 RUVBL2Q9Y230 463 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-212ENST00000545856 BTN3A1O00481 513 aa15.65■□□□□ 0.1
PRPF40A-212ENST00000545856 BIRC5O15392 142 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms