RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 STN1Q9H668 368 aaKnown RBP7.57□□□□□ -1.2
SNHG1-223ENST00000545440 EPB41L5Q9HCM4 733 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 TRIM39Q9HCM9 518 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 SARS2Q9NP81 518 aaKnown RBP7.57□□□□□ -1.2
SNHG1-223ENST00000545440 TPSG1Q9NRR2 321 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 SMOXQ9NWM0 555 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.57□□□□□ -1.23e-11■□□□□ 8.9
SNHG1-223ENST00000545440 ATXN10Q9UBB4 475 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 ZNHIT2Q9UHR6 403 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 ACSL6Q9UKU0 697 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 AMFRQ9UKV5 643 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 AAR2Q9Y312 384 aaKnown RBP7.57□□□□□ -1.2
SNHG1-223ENST00000545440 PLEKHM1Q9Y4G2 1056 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 PCYT1BQ9Y5K3 369 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-223ENST00000545440 NBEAQ8NFP9 2946 aa7.57□□□□□ -1.2
SNHG1-223ENST00000545440 IGHV1OR21-1A0A087WYE8 117 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 KIR2DS5A0A0G2JLQ3 304 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 A0A0G2JNG1 304 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 PMS2P1A4D2B8 440 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 GOLGA6L9A6NEM1 432 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 OR5K4A6NMS3 321 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 KIR2DS3K7RE56 304 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 HGSO14964 777 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 AURKAO14965 403 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 PPM1DO15297 605 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 KCNN4O15554 427 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 B4GAT1O43505 415 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 DUX1O43812 170 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 TNFSF15O95150 251 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 CBX7O95931 251 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 IGHA1P01876 353 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 PYGMP11217 842 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 ZNF8P17098 575 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 CSF2RBP32927 897 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 UGT1A5P35504 534 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 SPAM1P38567 509 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 TMPRSS3P57727 454 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 GSDMDP57764 484 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 OR1D5P58170 312 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 EIF3EP60228 445 aaKnown RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 HHEXQ03014 270 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 CCDC173Q0VFZ6 552 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 KLF1Q13351 362 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 SQSTM1Q13501 440 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 TRA2AQ13595 282 aaKnown RBP eCLIP7.56□□□□□ -1.22e-56■■■■□ 20.9
SNHG1-223ENST00000545440 ITGA9Q13797 1035 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 KIR2DS5Q14953 304 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 ANKRD20A2Q5SQ80 823 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 ANKRD20A1Q5TYW2 823 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 ANKRD20A3Q5VUR7 823 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 BROXQ5VW32 411 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 CHST15Q7LFX5 561 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 TMPRSS9Q7Z410 1059 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 ADGRG6Q86SQ4 1221 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 PIM3Q86V86 326 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 LRRTM4Q86VH4 590 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 KLHDC8BQ8IXV7 354 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 FBXO39Q8N4B4 442 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 TTC30BQ8N4P2 665 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 SLC25A41Q8N5S1 370 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 RNF10Q8N5U6 811 aaKnown RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 CELF2-AS1Q8N7Q2 184 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 SPC24Q8NBT2 197 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 OR4D9Q8NGE8 314 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 DNAJB8Q8NHS0 232 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 BLOC1S5Q8TDH9 187 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 UBE2Q2Q8WVN8 375 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 ZNF669Q96BR6 464 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 SPATA13Q96N96 652 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 FCRL3Q96P31 734 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 C19orf43Q9BQ61 176 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 TIMM29Q9BSF4 260 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 TSGA10Q9BZW7 698 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 B3GNT4Q9C0J1 378 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 OR2AG1Q9H205 316 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 PRORYQ9H606 182 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 RDH14Q9HBH5 336 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 IL17CQ9P0M4 197 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 TRIM10Q9UDY6 481 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 TBC1D29Q9UFV1 150 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 RALYQ9UKM9 306 aaKnown RBP7.56□□□□□ -1.2
SNHG1-223ENST00000545440 PCDHB10Q9UN67 800 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 KCNK6Q9Y257 313 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 PKP3Q9Y446 797 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 PRKAB1Q9Y478 270 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 LOXL2Q9Y4K0 774 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 CAPN6Q9Y6Q1 641 aa7.56□□□□□ -1.2
SNHG1-223ENST00000545440 IGHV5-10-1A0A0J9YXX1 117 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 GLYATL1P3A0A0U1RQE8 302 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 LILRA5A6NI73 299 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 PRR19A6NJB7 356 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 F5H423 210 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-223ENST00000545440 KMOO15229 486 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 NVLO15381 856 aaKnown RBP7.55□□□□□ -1.2
SNHG1-223ENST00000545440 EML2O95834 649 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 FTCDO95954 541 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 IGLV1-40P01703 118 aa7.55□□□□□ -1.2
SNHG1-223ENST00000545440 PTMAP06454 111 aaKnown RBP7.55□□□□□ -1.2
SNHG1-223ENST00000545440 JMJD7P0C870 316 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms